| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_11870 |
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| Symbol | |
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| ID | 8632823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 1374991 |
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| End bp | 1376448 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | putative efflux protein, MATE family |
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| Protein accession | YP_003313964 |
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| Protein GI | 269794509 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCT CAGCCACCAC CAACCCCACC GGCGGCGCCG GCACCGCCGA ACCTGTCGGC
ACCAACCGCT GGTACCTCTC GAGCGCGCCG ATGCTGCGCG CCCTCCTGCA CCTCTGCGTC
CCGATGGCAG CCGCGATGGT CGTCAGCGCG GTCTACAACG TCGTCAACGC CGGGTTCATC
GGGTCCCTGC ACGACAGCGC GCTCCTCGCG GCGGTCACCC TCGGCGCCCC GCTGCTCGCC
GTCGTCATGG CGGTCGGCGG CATGTTCGGC GTCGGGGGTG GTGCGCTGAT CTCACGCCTG
CTCGGCGCGA CGGAGCACGA CCCGACGCAG GCCGGGCAGA TCAGGCGCGT CTCGTCCTTC
GCGCTCTGGG GCTCCGTCGT GACCGGAGCC GCGATCAGCG TGGTCGGGCT CGTGCTGCTC
GACCCGCTCG TGTCCCTGCT GGGCGCAGAC AGCGCCGCGG CACCTGCGAC CCGTGCCTTC
GTCGGGACGC TGCTCGTCTT CGTCCCGGTC TTCGCCGCCG CGTTCTGCCT CGAGCAGCTG
GTCCGGGCCG AGGGCGCCGC GCGCCAGGTG ATGACTGCCC TCGTCGTCTC GACGGTCGCG
AACGTGGTGC TCGACGTCCT CTTCATCCTC GTCCTGCACC GGGGCGTGGC CGGGGCCGCG
CTCGCGATGG GCCTGTCGAA CGTCGTCACG GTCGTCTACC TCGCCGGGTG GCTCCACCGC
AGCAGCCAGC ACGTCCGGCT CTCCCCCCGG TGGTTCACGC TCTCGTCCAC GGTCCTGCGC
CCCGTCCTGG GTGTCGGGGT GAGCGAGCTG TTCCAGGCGT CGTTCCTGGT GGTCACGTCC
CTCGTGCTCA ACAACCTCGC CGCCACCTAC GGCGACACCG CGCTGGCTGC CATGGGGGTC
GCGGTCCGCG TCGCGCAGGT CCCCGAGTTC TTGGTCATGG GCGTGACGCT CGGTGTCCTG
CCGCTCTTCG CCTACGCCTA CGGCAAGGGC GACCGTGAGC GCCTCGCGTC GGCGCTGCGC
GTCTCGGCGA TCACGGTGGG GAGCATCGTG CTGGTCTCCG CGGCCACGGC CGTCGTGCTC
CGGGAGCAGC TGGTCTCGGC GTTCACGGCA GACCGCGCTG TCCTCGCGGT CGGTGTGACC
GTGCTGACGG CGCAGGTCGT CGCGATGGTC GCCAACGGGT TCGCCGGGCT GCTCACGTCG
TACTTCCAGG CGACCGGCCG CACCGTCCCG GCGATCGTCA TGTCGACGGC GCAGGGGGTG
CTGTTCGTCC CCGTCGTCCT CGCCGGCCAC GTGTGGTTCG GGCTGCCCGG CATCATCTGG
TCGTTGACCG TGTCCGAGGG CGTCGTGCTC GTCGTCGGGA TCGCGCTGTG GTTCGGCTAC
CGGCGCTCGA TCGACCGCGG CCTGGCCGAG GGCAGTCCCG AGCGCGCGGA GGCTGCGCTC
GAGCAGGCCG ACGCGTAG
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| Protein sequence | MSTSATTNPT GGAGTAEPVG TNRWYLSSAP MLRALLHLCV PMAAAMVVSA VYNVVNAGFI
GSLHDSALLA AVTLGAPLLA VVMAVGGMFG VGGGALISRL LGATEHDPTQ AGQIRRVSSF
ALWGSVVTGA AISVVGLVLL DPLVSLLGAD SAAAPATRAF VGTLLVFVPV FAAAFCLEQL
VRAEGAARQV MTALVVSTVA NVVLDVLFIL VLHRGVAGAA LAMGLSNVVT VVYLAGWLHR
SSQHVRLSPR WFTLSSTVLR PVLGVGVSEL FQASFLVVTS LVLNNLAATY GDTALAAMGV
AVRVAQVPEF LVMGVTLGVL PLFAYAYGKG DRERLASALR VSAITVGSIV LVSAATAVVL
REQLVSAFTA DRAVLAVGVT VLTAQVVAMV ANGFAGLLTS YFQATGRTVP AIVMSTAQGV
LFVPVVLAGH VWFGLPGIIW SLTVSEGVVL VVGIALWFGY RRSIDRGLAE GSPERAEAAL
EQADA
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