| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_11850 |
|---|
| Symbol | |
|---|
| ID | 8632821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1372204 |
|---|
| End bp | 1374240 |
|---|
| Gene Length | 2037 bp |
|---|
| Protein Length | 678 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting |
|---|
| Protein accession | YP_003313962 |
|---|
| Protein GI | 269794507 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCGGC ACGCAGGTGC AGCCGTGAGC CGGGAGTGCT GCGGCGGCGA CGACACGCAG
CCGTCGCCGG TGGCCTCTCC GCGGACCCTG CAGGGAGGAG AGTCGCAGGT GGTGGACCCC
GGCGCGCTCG CAGCGCCCGT CCCCACCTCG CGGTGGTGGC GCGACCGCTC GATCCTGGTC
CCGCTCGGCG CCGGCCTCCT CCTGGCGCTC GGCTACGCGC TCGAGTGGTC GGGGGCCGGC
GCGGCAGCCG CGGTCGTCCT CGCCGCGAGC CTGCTGGTCG GTGCGTCGAC CTTCGTGCCG
GGCGCCGTGC GCCGGCTCGC CCGCGGTCGG CTCGGCGTCG GTCTCCTCAT GACCGTCGCG
GCGGTCGGGG CGGTCCTCCT CGGGCACGTC GGGGAGGCTG CCGCACTCGC CTTCCTGTTC
TCGATCGCGG AGGCCCTCGA GGACCGCGCG ATGGACCGTG CGAAGGCCGG CCTGCGCTCG
CTGCTCTCCC TCGTCCCCGA GACGGCGACC GTCTCACGGC TGTCCGGCGA CGAGGTCGTC
CCGGTCGCCG AGGTCCGCGA GCTGGACCTG CTCGTGGTCC GCGCCGGTGA GCGCCTCGCG
ACCGACGGGG TGGTCGCCCA GGGGCGCAGC AGCATGGACG CGTCGGCCGT CACCGGGGAG
TCGATCCCCG TCGAGGTCGC ACCGGGCGAC GCCGTCGCCG CCGGCTCGAT CAACGGGTCG
GGGACGCTGC TCGTCGAGGC GACGGCCAGC GGCACCGAGA ACTCGCTCAC CACGATCGTG
CGGCTCGTCG AGCAGGCCCA CCAGCGCAAG GGCGACCGTG CCCGTGTCGC CGACCGGATC
GCCCGCCCGC TGGTGCCCGC GGTGCTCGTG GCCGCAGCGC TCGTGGCGCT CGGCGGCGCG
TTCACCGACG ACCCCGGCCT CTGGGTCGAG CGGGCCCTCG TGGTCCTGGT CGCGGCGTCG
CCGTGCGCCC TGGCCATCGC CGTCCCGGTC ACGGTGATCT CCGCGATCGG GTCGGCGAGC
CGCTTCGGGG TGGTCATCAC CTCCGGGCAG GCCTTCGAGC GGCTGGGGGC GGTGTCCGTG
GTGGCCTTCG ACAAGACCGG GACGCTCACG CAGAACCGCC CGACGGTGGT CGAGGTCGCG
ACCGCTGACG GCATCGACCG CGACGCGGTC CTCGAGGCCG CGGCAGCGCT CGAGGCCCGG
AGCACCCACC CGCTGGCCTC CGCGGTCCTC GCCGCGCACC CGGCGCCGCC GGTCGTCGAC
GACGCCCACG AGCTCGCCGG TCAGGGGCTC ACAGGGACGG TCCACGGGGC AGCGGTGCGG
GTCGGCAGCC CGCGCTGGGT GGATCCGGGG CTGCTCGAGG AGCGCTGCGC GAGGATGGAG
GCCGACGGCA TGACGGTCGT CGTCGTCGAG GTCGGCGGAC GACCGGCGGG GCTCCTGGGG
ATCCGCGACG AGCTGCGCCC CGAGGCGGCG GCCGCGGTCG CCGGTCTGCA CGCGCAGGGC
ATCGAGACCG TGATGCTCAC CGGGGACAAC CCCCGCACCG CGGCAGCGCT CGCCCGCACG
GTCGGCATCG CCGACGTCCG TGCCCAGCAG CTCCCCACCG ACAAGGCCGC GGCCGTCGAC
GCCCTCGGTG CCCGCGGCGT GACCGCGATG GTCGGTGATG GCATCAACGA CGCCCCGGCG
CTCGCGACCG CCGGCGTCGG GATCGCCATG GGGGCCACCG GCTCCGCCGC CGCCGTCGAG
TCGGCCGACG TCACCTTCAC CGGGTCTGAC CTGCGGCTGA TCCCGCAGGC GCTGGCCCAC
GCGCGACGCG GCCACGTGAT CATGACCCAG AACATCGTGC TCGCCCTGCT GGTCGTCGTG
GTCCTCGTCC CGCTGGCCCT GACCGGTACC GTCGCTCTCG CCGGGGTGGT GCTGGTGCAC
GAGCTCGCCG AGGTCCTCAT CATCGCCAAC GGCGTCCGGG CCTCGCGCGG TCGCCCCGCC
CTGCCGGGGC TCCCAGCAGC GGACGTCCCG GTACCGGCCA CCGCGCTGAC CCGCTGA
|
|---|
| Protein sequence | MLRHAGAAVS RECCGGDDTQ PSPVASPRTL QGGESQVVDP GALAAPVPTS RWWRDRSILV
PLGAGLLLAL GYALEWSGAG AAAAVVLAAS LLVGASTFVP GAVRRLARGR LGVGLLMTVA
AVGAVLLGHV GEAAALAFLF SIAEALEDRA MDRAKAGLRS LLSLVPETAT VSRLSGDEVV
PVAEVRELDL LVVRAGERLA TDGVVAQGRS SMDASAVTGE SIPVEVAPGD AVAAGSINGS
GTLLVEATAS GTENSLTTIV RLVEQAHQRK GDRARVADRI ARPLVPAVLV AAALVALGGA
FTDDPGLWVE RALVVLVAAS PCALAIAVPV TVISAIGSAS RFGVVITSGQ AFERLGAVSV
VAFDKTGTLT QNRPTVVEVA TADGIDRDAV LEAAAALEAR STHPLASAVL AAHPAPPVVD
DAHELAGQGL TGTVHGAAVR VGSPRWVDPG LLEERCARME ADGMTVVVVE VGGRPAGLLG
IRDELRPEAA AAVAGLHAQG IETVMLTGDN PRTAAALART VGIADVRAQQ LPTDKAAAVD
ALGARGVTAM VGDGINDAPA LATAGVGIAM GATGSAAAVE SADVTFTGSD LRLIPQALAH
ARRGHVIMTQ NIVLALLVVV VLVPLALTGT VALAGVVLVH ELAEVLIIAN GVRASRGRPA
LPGLPAADVP VPATALTR
|
|---|
| |