Gene Sked_11640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11640 
Symbol 
ID8632800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1349388 
End bp1349804 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content73% 
IMG OID 
Productprotein-tyrosine-phosphatase 
Protein accessionYP_003313941 
Protein GI269794486 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.215318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.181279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAGCC CCACCTCCCG CACCCCGCAC GTCGTCTTCG TGTGCCAGAA GAACGGCGGC 
AAGTCGCAGA TGGCCGCCGC CCTTCTCCGC GACCTGGCCG GTGACAGCGT CGTCGTCACC
TCCGCCGGCA CGCTCCCCGG GACCGCGCTC AACGTGCAGT CGGTCGAGTC GCTGGCCGAG
ATCGGCGTCG GTGTCGGCGA CGAGCACCCC AAGGCCCTGA CCCCCGAGAT GCTCGAGGCC
GCCGACCTCG TCGTGGTCCT CGGCACCGAG GCCCAGGTGC AGGCCCCGGA CGGCACGCCT
CTCGAGACCT GGGTCACCGA CGAGCCCTCC GACCGCGGCA TCACCGGCGC AGAGCGCATG
CGCCTCGTCC GGGACGACAT CCGGGCACGG GTCGGCGACC TGCGCCGCCG CCTCTGA
 
Protein sequence
MPSPTSRTPH VVFVCQKNGG KSQMAAALLR DLAGDSVVVT SAGTLPGTAL NVQSVESLAE 
IGVGVGDEHP KALTPEMLEA ADLVVVLGTE AQVQAPDGTP LETWVTDEPS DRGITGAERM
RLVRDDIRAR VGDLRRRL