Gene Sked_11480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11480 
Symbol 
ID8632784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1330452 
End bp1330898 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content70% 
IMG OID 
Productiojap-related protein 
Protein accessionYP_003313926 
Protein GI269794471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.574847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00298358 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCTGCAA CCGAACGTGC CGTCGAGCTG GCGATCGCCG CGGCCCGCGC CGCATCTGAC 
CGCAAGGCGG CCGAGATCAT CGCCCTGGAC GTCAGCGAGC AGCTCGTCCT GACCGACGTG
TTCCTCATCG CGTCCGGCAA CAACGAGCGA CAGGTGTCGG CCATCGTCGA CGCCGTCGAG
GAAGCCCTCC ACGGGCTCGG CGTGAAGCCG ATCCGCCGTG AGGGCAAGGG CGAGTCACGC
TGGGTCCTCA TCGACTTCGG CGACATCGTC GTGCACGTCC AGCACACGGA GGACCGCGTG
TACTACGCGC TCGAGCGCCT CTGGAAGGAC TGCCCCGTCA TCGAGCTGCC CGAGGACGCC
CGCGGCGGCG ACGGCATCGC GCCCGAGTAC GAGGCCGACG ACTTCGGCTA CCCGGTCCCG
GCCGACACGC GCGACGACAC CGTATGA
 
Protein sequence
MPATERAVEL AIAAARAASD RKAAEIIALD VSEQLVLTDV FLIASGNNER QVSAIVDAVE 
EALHGLGVKP IRREGKGESR WVLIDFGDIV VHVQHTEDRV YYALERLWKD CPVIELPEDA
RGGDGIAPEY EADDFGYPVP ADTRDDTV