| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_11460 |
|---|
| Symbol | |
|---|
| ID | 8632782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1328258 |
|---|
| End bp | 1328872 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | nicotinate-nucleotide adenylyltransferase |
|---|
| Protein accession | YP_003313924 |
|---|
| Protein GI | 269794469 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.156043 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00140918 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCTG TGCGGCAGCG TGTCGGTGTC ATGGGTGGCA CCTTCGACCC CATCCACCAC
GGGCACCTCG TCGCGGCGAG CGAGGTCGCG GCTCGGTTCG ACCTCGACGA GGTCGTGTTC
GTGCCCACGG GCCAGCCGAG CTTCAAGCAG GGGCAGGACG TCAGCCCTGC GGAGCACCGG
TACCTGATGA CCGTCATCGC GACCGCGTCG AACCCGAGGT TCACGACCAG CCGCGTCGAC
ATCGACCGGC CCGGTCTGAC CTACACCGTC GACACGTTGC GCGACCTGCG GGACCAGCGT
CCCGACGCCG ACCTGTTCTT CATCACCGGT GCGGACGCGG TCGAGCAGAT CGCGACGTGG
AAGAACGCCC CCGAGCTCTG GGAGATGGCG CACTTCGTGG CTGTCACCCG ACCGGGGCAC
GTGCTGTCGG TCGCCGGCCT GCCGAGCGAG CACGTGAGCC TCCTCGAGAT CCCGGCACTG
TCCATCTCGT CGACCGACTG CCGGGCCCGG GCCCGCGCAG GCGACCCGGT CTGGTACCTC
GTGCCGGACG GTGTCGTGCA GTACATCGCG AAGTACCGTC TGTACCGAGA GTCAGCTGTG
AAGGTGGCAT CATGA
|
|---|
| Protein sequence | MTSVRQRVGV MGGTFDPIHH GHLVAASEVA ARFDLDEVVF VPTGQPSFKQ GQDVSPAEHR
YLMTVIATAS NPRFTTSRVD IDRPGLTYTV DTLRDLRDQR PDADLFFITG ADAVEQIATW
KNAPELWEMA HFVAVTRPGH VLSVAGLPSE HVSLLEIPAL SISSTDCRAR ARAGDPVWYL
VPDGVVQYIA KYRLYRESAV KVAS
|
|---|
| |