Gene Sked_11440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11440 
Symbol 
ID8632780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1326620 
End bp1327960 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content74% 
IMG OID 
Productglutamate-5-semialdehyde dehydrogenase 
Protein accessionYP_003313922 
Protein GI269794467 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00180187 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGCCACG AGGTGACCGA AGCCGTGCTC GAGACCGCCC GACGCGCGAA GGTGGCGTCC 
CGCTCCCTCG CGGCGGCGAC CCGCGCGACG AAGGACGCGG CCCTCAACGC CCTGGCCGAC
GCCCTCGTCG CGGCCACGAC GGAGATCGTC GCCGCGAACG AGACCGACCT CGCGCGGGGG
CGCTCCAACG GGACGTCCCC GGGGCTCCTG GACCGGCTCG CCCTGACGCC CGAGCGCATC
GTCTCGATCG CCGACGCGCT GCGCGACCTC GCCGCCCTGC CGGACCCCGT CGGCGAGGTC
GTGCGCGGCT CGATCCTGCC GAACGGGCTG CGCCTGCGCC AGGAGCGCGT CCCCATGGGT
GTGGTGGGCA TGATCTACGA GGCCCGCCCG AACGTCACCG TCGACGCTGC CGGGCTCGCT
CTCAAGAGCG GCAACGCGGT GATCCTGCGC GGCGGCAGCG CCGCAGCCAG CTCGAACGAG
GTCATCGTGC GGGTGCTCGC CAGCGCGCTC GAGGAGCAGG GCCTGCCCGC CGACCTCGTC
CAGTCGATCG ACGCGCACGG CCGCCCCGGC GCCGTCGCCC TCATGCACGC CCGTGGCCTC
GTCGACGTCC TGGTGCCCCG CGGGGGTGCT GACCTCATCC AGACCGTGGT GCGCGAGTCG
ACGGTCCCCG TCATCGAGAC GGGCGTCGGC AACTGCCACG TCTACCTCGA CGCCTCGGCC
GAGCTCGAGA CCGCGGTCTC GATCGTGCTG AACTCCAAGA CGCACCGCGT CGGCGTCTGC
AACGCGGCCG AGACGCTGCT CGTCCACGCG GACGCCGCGC AGGCCCTGCT GCCCGGGGTG
CTCGCCGCGC TCGGCGCGGC CGACGTGGTG GTGCACGCCG ACGCGCTCAC CGCCGCGCTC
GCTCCGGAAG GCGTCACCGT CGTCCCGGCC ACCGACGAGG ACTGGGCCAC CGAGTACCTC
TCGCTCGACC TCGCGGTCCG CGTGGTGCCC GACCTCGACG GGGCCATCGA GCACATCCGC
ACGTGGACCT CGGGCCACAC CGAGGCGATC GTCACCCGTG ACCTGCGGTC GTCCGAGCGG
TTCGTCGCCG AGCTGGACTC TGCCGCGATC ATGGTCAACG CCTCGACCCG GTTCACCGAC
GGGGCCGAGT TCGGGCTCGG CGCGGAGATC GGCATCTCGA CCCAGAAGCT CCACGCGCGC
GGCCCGATGG GTCTCGCCGA GCTGACCACC ACCAAGTGGG TCGTCAACGG CGACGGGCAC
GTGCGCGGCG CGGTCGCCGC CCCTGCGCGG CCGGTGACCT GCGCTCCGGC CGCCGAGAGC
TCCGGTGACC TCTCGGGGTG A
 
Protein sequence
MRHEVTEAVL ETARRAKVAS RSLAAATRAT KDAALNALAD ALVAATTEIV AANETDLARG 
RSNGTSPGLL DRLALTPERI VSIADALRDL AALPDPVGEV VRGSILPNGL RLRQERVPMG
VVGMIYEARP NVTVDAAGLA LKSGNAVILR GGSAAASSNE VIVRVLASAL EEQGLPADLV
QSIDAHGRPG AVALMHARGL VDVLVPRGGA DLIQTVVRES TVPVIETGVG NCHVYLDASA
ELETAVSIVL NSKTHRVGVC NAAETLLVHA DAAQALLPGV LAALGAADVV VHADALTAAL
APEGVTVVPA TDEDWATEYL SLDLAVRVVP DLDGAIEHIR TWTSGHTEAI VTRDLRSSER
FVAELDSAAI MVNASTRFTD GAEFGLGAEI GISTQKLHAR GPMGLAELTT TKWVVNGDGH
VRGAVAAPAR PVTCAPAAES SGDLSG