Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_11430 |
Symbol | |
ID | 8632779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1325248 |
End bp | 1326507 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | glutamate 5-kinase |
Protein accession | YP_003313921 |
Protein GI | 269794466 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0015936 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCGATT CCGGAACATC GATCTCTGAC CGACACGACT CCGACTCGAC CAGCAGCACC CCCCAGCGCA CGCCGCAGGC ACCCGGCGAG GGCGCCTCGG AGCGTGACAG CCCGATCCTC CCCGTCCCGA AGACCCCGCG GTCCCTCATG GGCACCGCGG GGCGGGTCGT AGTGAAGATC GGCTCGTCCT CCCTCACCCG TGAGGACGGC ACGCTCGACT CCGACGCGCT GACAGCGCTC GTCCAGGTCA TCGCCGCACG GCACGCCGCG GGGTACCAGG TCGTCCTGGT CACCTCGGGC GCCCTGGCGG CGGGCCTGGG CCCCCTCGGC CTCTCGGCCC GTCCCGGCGA CCTCGCCACG GCCCAGGCCG CCGCGTCCGT GGGCCAGGGC CTCCTCGTGG CCCGGTACAC CGCGGCCTTC GCGGCGCACG GCATCCAGGT CGGGCAGCTG CTGCTGACGG CCGAGGACAC CGTCCGGCGC GGGCACTACC GGAACGCGCA GCGTTCCCTC GAGCGTCTTC TCGACCTGGG CGTCGTGCCC GTGGTCAACG AGAACGACGC GGTCGCGACG GACGAGATCC GCTTCGGCGA CAACGACCGC CTCGCGGCGC TCGTCTCGCA CCTCGTGCGC GCCGACGCGA TGGTGCTCCT CACCGACGTC GACGGCCTCT ACGACGGACC GCCGTCCCGT GAGGGCTCGA AGCGCATCCC CGAGGTGCGC AGCCCCGCGG ACATCGAGGA CGTCGAGGTC ACCGGCAGCG GCAGCTCTGT GGGGACCGGC GGGATGGTCA CCAAGCTCAA CTCGGTCCTC ATCGCGACGC AGTCCGGCAT CCCGGTCGTG CTGACGCAGG CCGTGAACGT CGAGGGCGCA CTGCGGGGCG ACCTCGTCGG CACGTGGTTC CACGCGACCG GCCGCCGTAC GACGCGACGC CGGCTCTGGC TCGCGTACGC GTCGAAGACC CGCGGCAGCC TGGTGCTCGA CGACGGGGCC GTCCACGCGG TCCTCGGGGG CACGGCCTCG CTCCTGCCCG CGGGCATCAC GGGGGTCGTC GGCGAGTTCG AGGCGTCGGA CCCCGTCGAG CTCGTGGACC GCGAGGGGAG GGTCGTCGCC CGCGGGCTCT CGGCCTTCGA CTCCGCGGAG ATCCCCGACC TCATGGGGCA GACCACGGGA GACCTGCGCG ACTCCCTGGG GGAGGGGTAC GACCGTGCGG TGGTGCACCG CGACGACCTC GTGCTCGTGC GGCGCCGCAG GCGCAGCTGA
|
Protein sequence | MSDSGTSISD RHDSDSTSST PQRTPQAPGE GASERDSPIL PVPKTPRSLM GTAGRVVVKI GSSSLTREDG TLDSDALTAL VQVIAARHAA GYQVVLVTSG ALAAGLGPLG LSARPGDLAT AQAAASVGQG LLVARYTAAF AAHGIQVGQL LLTAEDTVRR GHYRNAQRSL ERLLDLGVVP VVNENDAVAT DEIRFGDNDR LAALVSHLVR ADAMVLLTDV DGLYDGPPSR EGSKRIPEVR SPADIEDVEV TGSGSSVGTG GMVTKLNSVL IATQSGIPVV LTQAVNVEGA LRGDLVGTWF HATGRRTTRR RLWLAYASKT RGSLVLDDGA VHAVLGGTAS LLPAGITGVV GEFEASDPVE LVDREGRVVA RGLSAFDSAE IPDLMGQTTG DLRDSLGEGY DRAVVHRDDL VLVRRRRRS
|
| |