Gene Sked_11320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11320 
Symbol 
ID8632768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1308860 
End bp1309816 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content75% 
IMG OID 
Productphosphoglycerate dehydrogenase-like oxidoreductase 
Protein accessionYP_003313910 
Protein GI269794455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0214675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCC TCCTCCCCAC GTCCCTGTCC CTCGACCTCC CCGTCGACCA GACCGTCGAC 
GGCGTCACCT ACGTCTCCTA CGCGCCCGAC GCCCCGGTGC CCGACGCGCA CACCGACGCC
GACGCGCTCG TCGCCTGGGG GAACACGTCC GAGCAGCTGG CCGACACCGC GCGCCGTCTC
ACCGCCCTGC GGTGGGTCCA GGCCCTCGCC GCAGGTCCCG ACGCGATCCT CGCCGCGGGC
TTCGCGCCCG AGGTCGTCGT CACCTCCGGC CGCTCGCTGC ACGACGGCCC GGTCTCCGAG
CACACGCTCG CCCTGGCCCT GTCGGCGGCA CGGCGCCTCG ACCTCATGGT GGACGCCCAG
CGGGACTCCC GGTGGGCAGG CGAACTCGGG GGCTCGCAGT CCGGCGACCG GGCCACCTAC
CCCGGCCTCG GGACCCTCGC CGGGGCAGCG GTGACCGTGT GGGGCTTCGG GTCGATCGGT
CAGGCGCTCG CGCCGCTCCT GCAGATGCTC GGGGCGGACG TCGTCGGCGT CGCCACGACC
GCCGGCGAGC GGTCCGGGTT CCCCGTGATC ACCGAGGACG AGCTGCCCGC ACGGCTCGCG
GAGACGGACC TGCTCGTCGC GATCCTCCCC GCCACCCCCG AGACCGAGAA GATCGTCTCC
GAGAAGGTCT TCGCGGCGCT CCCGGACCAC GCGTGGGTGG TCAACGTCGG ACGCGGGGCG
ACCCTCGACG AGGTGGCCCT CGAGCAGGCG CTGCGCGCCG GGACCCTCGG GGGCGCTGCT
CTCGACGTCG TGGCCACCGA GCCGCTCCCG GCGTCGTCGA CGCTGTGGGA GACCCCGAAC
CTCATCCTCA CGCCGCACGC GGCCGGCGGA CGACCCCAGG GCGCCACCGA GCTCGTCGCG
GAGAACGTCG CCGCTTTCCG AGAGGGCCGG ACGCTCCGCA ACGTCGTCTC GCGCTGA
 
Protein sequence
MKVLLPTSLS LDLPVDQTVD GVTYVSYAPD APVPDAHTDA DALVAWGNTS EQLADTARRL 
TALRWVQALA AGPDAILAAG FAPEVVVTSG RSLHDGPVSE HTLALALSAA RRLDLMVDAQ
RDSRWAGELG GSQSGDRATY PGLGTLAGAA VTVWGFGSIG QALAPLLQML GADVVGVATT
AGERSGFPVI TEDELPARLA ETDLLVAILP ATPETEKIVS EKVFAALPDH AWVVNVGRGA
TLDEVALEQA LRAGTLGGAA LDVVATEPLP ASSTLWETPN LILTPHAAGG RPQGATELVA
ENVAAFREGR TLRNVVSR