| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_11220 |
|---|
| Symbol | |
|---|
| ID | 8632758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1300471 |
|---|
| End bp | 1302747 |
|---|
| Gene Length | 2277 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent DNA helicase RecG |
|---|
| Protein accession | YP_003313900 |
|---|
| Protein GI | 269794445 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.134358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0633826 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCATCG ACCACCCCTT CACCCTCGAC GAGCCCCTCA CCAAGGTCTT CGAGAAGCGC
ACCTCGAACC AGCTCGCCAA GCTGGGCCTC ACGACCACCG GCGACCTGCT CCGTCACTAC
CCGCGGCGGT ACGCCGACCC GGGCGCCATG TCCCAGCTCT CGACCCTCGT GGTGGGAGAG
CACGTCACCG TGATGGCGCA GGTGGTCAGC GCGACGGTCC GAGAGATGCG CTCGCGCGGC
GGCGCGATGC TCCAGGCGGT CGTCTCGGAC GGCACGGACC GACTCTCGCT CACCTTCTTC
GCCAAGCACC CCGGTGCGCT GCGCACCCAC GAGTCCCGGC TGAAGCCCGG CCGTGCCGGA
CTCTTCACCG GGGTGGTCTC CGAGTACCGC AACGAGAGGC AGCTCACCCA CCCGGACTAC
CTGCTCCCCG GCGTGGACGT CGAGAACGAG GTCGACGCGC TGCTCGAGGT CAGTCGCCTC
ATGCCGATCT ACCCGGCCAC CGCGTCCTTC GCCTCGTGGA AGATCCACAA GTGCGTCCGC
CAGGTCCTCG ACCCGCTCCA CGTCGACGAC CTCGCCGACC CCGTCCCGGC GGACGTGCTC
GGTCGACGGA ACCTCGTGCC GCTGGTGCAG GCCTTCCGGG ACATCCACCT GCCGGAGAGC
GAGAGCGAGT GGCACCGCGG CCAGAAGCGC CTGCGGTACG AGGAGGCCTT CGTCCTGCAG
ACCGCCCTCG CCCTGCGACG GTCGGAGGCC GCCGCCCTCG AGGCGACCTC GCGGACCCTC
GTCGAGGACG GCCCGTCGAT CCTGCGCGAC TTCGACGCCG CCCTCCCCTT CACCCTCACC
ACCGGGCAGC GGGAGGTCGG CGACGAGATC GCGGCCGAGC TCGCGGCCCC CCACCCCATG
CAGCGCCTGC TCCAGGGCGA GGTCGGCTCG GGCAAGACCG TCGTCGCGCT GCGGGCCATG
CTCCAGGTCG TCGACGCCGG AGGGCAGGCC GCACTCCTGG CACCGACCGA GGTGCTCGCC
GCCCAGCACG CCCGGACCCT GGCCGCCCTG CTCGGCGACC TCGCCGCAGG CGGCATGCTC
GGCGGGGCCG CCCACGGCAC CCGCGTCGCC CTGGTCACCG GGTCCCAGCC GGCCGCCGTG
AAGAAGAAGA ACCTGCTCGA CGCCGCGTCG GGTGCCGCCG GGATCGTCGT CGGCACGCAC
GCCCTGCTCA GCGCAGGGGT GCAGTTCGCC GAGCTCGGCC TCGTCGTCGT CGACGAGCAG
CACCGCTTCG GTGTCGAGCA GCGCGACCTG CTGCGTGCCA AGGCCCGCAC CGTCCCGCAC
CTGCTGGTCA TGACCGCCAC CCCGATCCCG CGCACCGTCG CCATGACCGT CTTCGGCGAC
CTCGAGACCT CGACGCTGCG CGAGATCCCC GCCGGGCGCT CCGGCATCAC CACCTACGTC
GTGCCCGCCC AGAAGCCCGC ATGGGTCTCG CGCACCTGGG CCAAGGTGCG CGAGGAGATC
GACGCCGGCC GCCAGGCCTA CGTCGTCTGC CCGCGGATCA CCGGGGACGA CTCGTCCGAG
GACGACGCGA CGCCCGCTCT CGACCCGGCA GCGCTCGCGG GCACCGACGA GGACCGCGAC
AACCCGGGCG GTCCCGCCGC GTCTGCGGCG AGGTCGCGGA CGCCCCTGCG CGCGGTCCTC
GAGGTCGCCG CCGAGCTGGC GGCCCTCGAG GTCTTCCGCG GGGTGCGGAT CGGCATCCTC
CACGGGCAGA TGCCCCAGGC TGAGAAGGAG GCTGCCATGG CGGCCTTCAC GGCGGGCGAG
GTCGACCTCC TCGTGTCGAC GACGGTCATC GAGGTCGGGG TCGACGTCCC CCGTGCCACC
GCGATGGTCG TGCTCGACGC CGACCGCTTC GGCCTGTCGC AGCTGCACCA GCTGCGTGGG
CGGGTCGGGC GTGGGGCCGA CGCCGGGATC TGCTTCCTCG TGTCGGAGAT GGCCGACGCA
GAACCGGCGA AGACCCGCCT CACCACGCTC GCGTCGACTA CCGACGGCTT CGAGCTCGCC
GCCGCCGACC TCGAGATGCG CAGCGAGGGC GACGTGCTCG GCGCCGCGCA GTCGGGCCGC
TCGACGTCGC TCCAGCTGCT GCGCGTGGTC CGCGACACCG CCGTCATCGA GCAGGCCCGC
GAGGACGCGG CCGCGGTCGT GGCCGTCGAC CCGACGCTCG TCACCCACCC GGTGCTGCTG
GCCGAGATCA CCGGACGGGT GACGGGGGAG CGGGCGGAGT ACCTCGACCG GTCGTGA
|
|---|
| Protein sequence | MSIDHPFTLD EPLTKVFEKR TSNQLAKLGL TTTGDLLRHY PRRYADPGAM SQLSTLVVGE
HVTVMAQVVS ATVREMRSRG GAMLQAVVSD GTDRLSLTFF AKHPGALRTH ESRLKPGRAG
LFTGVVSEYR NERQLTHPDY LLPGVDVENE VDALLEVSRL MPIYPATASF ASWKIHKCVR
QVLDPLHVDD LADPVPADVL GRRNLVPLVQ AFRDIHLPES ESEWHRGQKR LRYEEAFVLQ
TALALRRSEA AALEATSRTL VEDGPSILRD FDAALPFTLT TGQREVGDEI AAELAAPHPM
QRLLQGEVGS GKTVVALRAM LQVVDAGGQA ALLAPTEVLA AQHARTLAAL LGDLAAGGML
GGAAHGTRVA LVTGSQPAAV KKKNLLDAAS GAAGIVVGTH ALLSAGVQFA ELGLVVVDEQ
HRFGVEQRDL LRAKARTVPH LLVMTATPIP RTVAMTVFGD LETSTLREIP AGRSGITTYV
VPAQKPAWVS RTWAKVREEI DAGRQAYVVC PRITGDDSSE DDATPALDPA ALAGTDEDRD
NPGGPAASAA RSRTPLRAVL EVAAELAALE VFRGVRIGIL HGQMPQAEKE AAMAAFTAGE
VDLLVSTTVI EVGVDVPRAT AMVVLDADRF GLSQLHQLRG RVGRGADAGI CFLVSEMADA
EPAKTRLTTL ASTTDGFELA AADLEMRSEG DVLGAAQSGR STSLQLLRVV RDTAVIEQAR
EDAAAVVAVD PTLVTHPVLL AEITGRVTGE RAEYLDRS
|
|---|
| |