| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_11010 |
|---|
| Symbol | |
|---|
| ID | 8632737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1280364 |
|---|
| End bp | 1281893 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | glutamyl-tRNA synthetase |
|---|
| Protein accession | YP_003313881 |
|---|
| Protein GI | 269794426 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTACGTGT CCGTCGAGAC CACCCCCGCA GCCGTCGCCA CGCCCTCGGG CAGCGCCGTC
CGCGTCCGCT TCTGCCCGTC GCCGACCGGG ACCCCGCACG TGGGGCTCAT CCGGACCGCC
CTGTTCAACT GGGCCTACGC GCGGCACACG GGCGGGACCT TCGTGTTCCG CATCGAGGAC
ACGGACGCCG AGCGCGACTC GGAGGAGAGC TACCAGCAGC TCCTCGACGC GCTGCGCTGG
CTCGGGCTCG ACTGGGACGA GGGCATCGAG GTCGGCGGCC CGCACGAGCC GTACCGTCAG
TCCCAGCGCA GCGACATCTA CCAGGACGTC ATCCGTCGCC TCGTCGAGGG CGGCTACGCC
TACGAGTCCT TCACCACGCC CGAGGAGACC GAGGCGCGCA ACGTCGCTGC CGGCCGCCCC
AAGGTCATGG GCTACGACGG CTTCGACCGC GACCTCACCG ACGAGCAGAA GGCGGGCTTC
CGGGCCGAGG GCCGTGAGCC CGTCCTGCGC CTGCGCATGC CCGACGAGGA CGTGACCGTC
ACCGACCTCG TCCGCGGCGA CGTGACCTTC AAGGCCGGCA CCGTCCCCGA CTACGTCATC
GTCCGCGCCA ACGGCCAGCC GCTGTACACG CTGGTCAACC CGGTCGACGA CGCGCTCATG
GAGATCACGC ACGTGCTGCG CGGCGAGGAC CTGCTGTCCT CCACGCCCCG CCAGGTGGTG
CTGTACCGGG CGCTGCTCGA GATCGGCGTC GCTAAGGTCG TGCCGGCCTT CGGGCACCTG
CCGTACGTCA TGGGCGAGGG CAACAAGAAG CTGTCCAAGC GCGACCCCGA GTCCAACCTC
TTCCTGCACC GCGAGCGCGG CTTCACTCCC GAGGGCCTGC TCAACTACCT CGCGCTGCTC
GGCTGGAGCA TCTCGGCCGA CAACGACATC TTCACGGTCG ACGAGCTCGT CGCGGCCTTC
GACGTCGCCG ACGTGCTGCC GAACCCGGCG CGCTTCGACG TGAAGAAGGC GGAGGCGATC
AACGCGACGC ACCTGCGCCG CCTCGACGGC GACGACTTCC GCAACCGTCT GGTGCCGTAC
CTGCACGCGG CGGGCCTGGT CCCGGCCGAC TCGTACGCCG ACCTCGCTCC CGAGGTCCAG
GCGCTGCTGG ACGCCGGTGC GCCGCTGGTC CAGGAGCGCA TGACGCTCCT CGGCGAGGCC
CCCGGGATGC TCGGCTTCCT GTTCGTGGCC GACGACGCCG TCGTGGTCGA GGAGGCTGCT
CGGACGGCGC TCCGCGAGGA GGCCGCCGAG GTCCTCGACC GTTCGATCGC GACCCTCGAG
GCGCTCGAGG ACTTCGGCCC GACCGCGCAG CAGGACGCCC TCAAGGCCGA GCTGGTCGAG
GCGATGGGGG TCAAGCCCAA GTTCGCCTTC GCGCCGCTGC GCGTCGCGAT CACGGGGCGC
CGTGTGTCGC CGCCGCTGTT CGAGTCGATG GAGATCCTGG GCAAGGAGCG TTCCCTCGTC
CGTCTGCGTG CGCTGCGGGC CTCTCTGTGA
|
|---|
| Protein sequence | MYVSVETTPA AVATPSGSAV RVRFCPSPTG TPHVGLIRTA LFNWAYARHT GGTFVFRIED
TDAERDSEES YQQLLDALRW LGLDWDEGIE VGGPHEPYRQ SQRSDIYQDV IRRLVEGGYA
YESFTTPEET EARNVAAGRP KVMGYDGFDR DLTDEQKAGF RAEGREPVLR LRMPDEDVTV
TDLVRGDVTF KAGTVPDYVI VRANGQPLYT LVNPVDDALM EITHVLRGED LLSSTPRQVV
LYRALLEIGV AKVVPAFGHL PYVMGEGNKK LSKRDPESNL FLHRERGFTP EGLLNYLALL
GWSISADNDI FTVDELVAAF DVADVLPNPA RFDVKKAEAI NATHLRRLDG DDFRNRLVPY
LHAAGLVPAD SYADLAPEVQ ALLDAGAPLV QERMTLLGEA PGMLGFLFVA DDAVVVEEAA
RTALREEAAE VLDRSIATLE ALEDFGPTAQ QDALKAELVE AMGVKPKFAF APLRVAITGR
RVSPPLFESM EILGKERSLV RLRALRASL
|
|---|
| |