| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_10920 |
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| Symbol | |
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| ID | 8632728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 1269819 |
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| End bp | 1272428 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | superfamily II RNA helicase |
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| Protein accession | YP_003313872 |
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| Protein GI | 269794417 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.769865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.737548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTCCA CGACGCCGTA CCAGATCAGC CTCCTCGACC ACGTCCCGCC TGCCGTGGGC
GGTGCCGCGC CGGACCCTGA CGAGCTCTTC CAGGGCTTCG CGTCGTGGGC CGAGGACCGC
GGGCTGAGCC TGTACCCCGC GCAGGAGGAG GCGCTCATCG AGCTGGTCTC CGGCTCGCAC
GTCATCCTCA GCACCCCGAC CGGTTCGGGG AAGTCGCTCG TGGCCACGGG CGCGCACTAC
GTGGCGATGG CCGAGGGCAA GCGGTCCTTC TACACCGCTC CCCTCAAGGC GCTCGTGAGC
GAGAAGTTCT TCGCCCTCGT CGAGGTGTTC GGCTCGGAGA ACGTCGGCAT GATGACCGGC
GACTCGTCGG TCAACCCGAC AGCGCCGATC ATCTGCTGCA CTGCCGAGAT CCTCGCGAAC
ATCGCCCTGC GCACCGGCGG GGTCGACGCG GACGACCCGG GCGTCGACCA GGTGGTCATG
GACGAGTTCC ACTTCTACGC CGACCCCCAG CGCGGCTGGG CGTGGCAGGT GCCCCTGCTC
GAGCTGCCCA AGGCGCAGTT CCTGCTCATG TCGGCGACCC TCGGCGACAC GGAGATGTTC
CGCACCGACC TCGAGGAGCG CACGGGCCGC ACCGTCGCCG AGGTGACGAG CGTCGACCGC
CCGGTCCCGC TGAGCTTCAG CTACGTCATC GAGCCCCTCG GCGAGGTCAT CGAGGACCTC
GTGCACACGC ACCGCGCCCC GGTGTACGTC GTGCACTTCA CGCAGAAGGA CGCGGTCGAC
CGTGCCCAGT CGCTGCTGAG CACCAACCTC GCGAGCAAGG AGGAGAAGGC CGCGATCGTC
GCCGAGCTCG GCGACTTCCG CTTCACCTCG GGCTTCGGCA AGTCGCTCAG CAAGTACCTG
CGCGCGGGCA TCGGCGTGCA CCACGCGGGG ATGCTGCCCA AGTACCGCCG CGTCGTCGAG
CGCCTCACGC AGAAGGGCCT GCTCAAGGTC GTCTGCGGGA CCGACACCCT GGGCGTCGGC
ATCAACGTGC CGATCCGCAC CGTGCTGCTC ACGAGCGTCG TGAAGTTCGA CGGCGAGCGC
ATGCGCCACC TCACCGCGCG CGAGTTCCAC CAGATCGCGG GCCGCGCCGG GCGCGCCGGC
TACGACACCA TGGGCGACGT CATCGTCATG GCGCCCGAGC ACGTCATCGA GAACCGCAAG
CTGCTCGAGC GCGCCGGCGA CGACCCGAAG AAGCTCAAGA AGATCGTCCG CAAGAAGGCT
CCCGCCGGAG CGGTCAACTG GACGGACAAG ACCTTCGAGC GCCTGCGCGA CGCCGACCCG
GAGCCGCTCA CCAGCCACTT CACGGTGAGC CACGCCCTCG TGCTCAACGT GCTCGCGCGC
AGCACGAAGG CCAGCGGCGA CCCGGTGAGC GCCATGCGAC ACCTGCTCAC CGCCAACCAC
GACTCCGAGC AGAACAAGGC CGCGCACGTG CGCCAGGTGT TCCGCATCTA CCGCTCGCTG
CGCCAGGCCG GCATCGTCGA GAAGGTCTCT GACGGCAGGG GCGGCTACAC CGTGCGACTC
ACGGTCGACC TGCCACGCGA CTTCGCGCTC AACCAGCCGC TCTCCCCCTT CGCCCTCGCG
GCCCAGGACC TCCTCGAGCC CGAGTCGCCG ACGCACGCCC TGGACGTCGT CTCCGTCATC
GAGGCGACCC TCGACGACCC CCGCCAGGTG CTCTACGGCC AGCAGCGCGC CGCCCGCGGC
GAGGCCATCG GTGCCCTCAA GGCCGAGGGG TACGACTACG AGGAGCGCAT GGCCGCCCTC
GAGGACGTGT CGTGGCCCAA GCCCCTCGAG GAGCTGCTGG GCGCCGCCTT CGAGACGTAC
AAGAAGACCA ACCCGTGGGT CGCCGACCAG GAGCTCTCAC CCAAGTCCGT GGTCCGCGAC
ATGGTCGAGC GCGCCATGAC CTTCGCGGAG TTCGTGTCGA AGTACCAGCT CGACCGCACC
GAGGGCGTCG TGCTGCGCTA CCTCGCCGAC GCGTACCGGA CGCTGCGCCA GACGGTGTCG
ACCGAGCACA AGACCGAGGA GGTCGAGGAC CTCGTCGAGT GGCTCGGCGA GCTGGTCCGC
GGGGTCGACT CGAGCCTGCT CGACGAGTGG GAGCGGCTGT CCAACCCCGT CGACGACGAC
GCCGACACCC TGACGGGCGA CACCCCGCTC AACGGGACCG TCGTCGAGGC GCCCGTCCGC
CCGGTCACCG GGAACGTCCG CGCCTTCCGG GTGCTGCTGC GCAACGCGAT GTTCAAGCGC
GTCGAGCTCG CCTCCCGCGA GGCGTACTCG ACGCTCGGGT CGCTCGACGG CACCGACGGC
TGGGACGCCG ACGCGTGGGC CGACGCCCTC GACCCGATGT TCGAGCACTA CGGCGACGAC
GCGATCGGCT TCGGGCCGCA GGCCCGCTCC CCCAAGCTGC TCACCATCAC CGAGGGGGTC
GACGGCAACC CCCGGTTCTG GTCGGTGCGC CAGGTGCTCG ACGACCCCGA CGGCGACCAC
GACTGGGGCA TCACCGCGAC CGTCGACCTC GACGCGAGCG ACGAGGCCGG CGAGGTCGTC
CTCCACGTCA CCGACGTCGC GGCGATGTAG
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| Protein sequence | MTSTTPYQIS LLDHVPPAVG GAAPDPDELF QGFASWAEDR GLSLYPAQEE ALIELVSGSH
VILSTPTGSG KSLVATGAHY VAMAEGKRSF YTAPLKALVS EKFFALVEVF GSENVGMMTG
DSSVNPTAPI ICCTAEILAN IALRTGGVDA DDPGVDQVVM DEFHFYADPQ RGWAWQVPLL
ELPKAQFLLM SATLGDTEMF RTDLEERTGR TVAEVTSVDR PVPLSFSYVI EPLGEVIEDL
VHTHRAPVYV VHFTQKDAVD RAQSLLSTNL ASKEEKAAIV AELGDFRFTS GFGKSLSKYL
RAGIGVHHAG MLPKYRRVVE RLTQKGLLKV VCGTDTLGVG INVPIRTVLL TSVVKFDGER
MRHLTAREFH QIAGRAGRAG YDTMGDVIVM APEHVIENRK LLERAGDDPK KLKKIVRKKA
PAGAVNWTDK TFERLRDADP EPLTSHFTVS HALVLNVLAR STKASGDPVS AMRHLLTANH
DSEQNKAAHV RQVFRIYRSL RQAGIVEKVS DGRGGYTVRL TVDLPRDFAL NQPLSPFALA
AQDLLEPESP THALDVVSVI EATLDDPRQV LYGQQRAARG EAIGALKAEG YDYEERMAAL
EDVSWPKPLE ELLGAAFETY KKTNPWVADQ ELSPKSVVRD MVERAMTFAE FVSKYQLDRT
EGVVLRYLAD AYRTLRQTVS TEHKTEEVED LVEWLGELVR GVDSSLLDEW ERLSNPVDDD
ADTLTGDTPL NGTVVEAPVR PVTGNVRAFR VLLRNAMFKR VELASREAYS TLGSLDGTDG
WDADAWADAL DPMFEHYGDD AIGFGPQARS PKLLTITEGV DGNPRFWSVR QVLDDPDGDH
DWGITATVDL DASDEAGEVV LHVTDVAAM
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