Gene Sked_10850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_10850 
Symbol 
ID8632721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1264026 
End bp1264847 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content73% 
IMG OID 
Productpyridoxal phosphate enzyme, YggS family 
Protein accessionYP_003313865 
Protein GI269794410 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.384201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.913003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCCA TGCCCCCGAC CGCCCCGAGC GACCCGACGC CCACGCCGTC CTTCGCAGAC 
GCACTCGCCC GCGTGCACGA CCGCATCGAG CGAGCACGCA CCTCCGCCGG GCGCGACGAC
CGCGACGGCA GCGACGGCAG CGACGACAAG GTCCGGCTGC TGCTCGCCAC CAAGACGCAG
GACGCCGACG ACGTCCGCGC CGCCGTGCTC GCCGACCGCG CAGCAGGCCG CCCCGGCGAG
GTCCTCGTCG GCGAGAACCG GGTGCAGGAG CTCACCGCGA AGGCACCGGC GCTGGCAGAC
CTCGCCCTGA CCGTGCACCT CATCGGCGCC CTGCAGTCCA ACAAGGTCAA CCACGCCCTG
CGCGCGCTCG CCCAGCACCG CCAGGCCTGC GTCGAGACCG TCGACTCCAT CGCCCTCGCC
GAGAAGATCG GCAGCCGGGT GCTCACAGCG GCCGCAGAGG CAGGTGACGG GAGCACGGAC
ATCCCGCTCG ACGTCTACGT GCAGGTGAAC GTCTCGGGCG AGGAGTCCAA GGCCGGGGTC
TCCCCCGAGG CGGCGGTCGA GCTCGCGCTC GCGGTCGCCG AGGTCGACGG TCTCCGTCTC
TCCGGGTTCA TGACGATCGG GGCACGGTCG TCGGACGAGC GCCTGGTCCG CGCAGGCTTC
GCGAGGCTGC GTGAGCTCCG CGACGAGGTC CTCGGGTCGG GGGCGCCGGG GACCTCGGCT
GCCACCGAGC TGTCGATGGG CATGTCGCAG GACCTCGAGT GGGCCGTCGC CGAGGGGGCG
ACGCTCGTGC GCGTCGGCTC CGCGGTCTTC GGGGCTCGCT GA
 
Protein sequence
MLSMPPTAPS DPTPTPSFAD ALARVHDRIE RARTSAGRDD RDGSDGSDDK VRLLLATKTQ 
DADDVRAAVL ADRAAGRPGE VLVGENRVQE LTAKAPALAD LALTVHLIGA LQSNKVNHAL
RALAQHRQAC VETVDSIALA EKIGSRVLTA AAEAGDGSTD IPLDVYVQVN VSGEESKAGV
SPEAAVELAL AVAEVDGLRL SGFMTIGARS SDERLVRAGF ARLRELRDEV LGSGAPGTSA
ATELSMGMSQ DLEWAVAEGA TLVRVGSAVF GAR