Gene Sked_10680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_10680 
Symbol 
ID8632704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1246017 
End bp1247897 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content71% 
IMG OID 
Productacetolactate synthase, large subunit 
Protein accessionYP_003313848 
Protein GI269794393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.141846 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCAGG GCCCCACACC CGCACCGCCT CGCGGCGGAG CGCCGGCAGG AGCGGCTCCC 
GCCGCCACGC CGAGCGCACC GAAGCCAGCC CCCGGCGACG CCGTGCGCCG GCCGCGCACC
GACGTCTCGA CCGCCGAGGT CACCGGCGCC GAGTCGATCG TCCGCTCGCT CGAGGCCGCG
GGCGTCGAGA CCGTCTTCGG CATCCCCGGC GGCGCGATCC TCCCGACCTA CGACCCGCTC
ATGGACTCGA AGAAGATCCG GCACATCCTG GTCCGGCACG AGCAGGGCGG CGGCCACGCC
GCGTCCGGCT ACGCCCACGC GACCGGCCGC GTCGGCGTCA CCATGGCGAC CTCGGGCCCC
GGTGCGACGA ACCTCGTGAC CCCGATCGCC GACGCGAACA TGGACTCGAT CCCCATGGTC
GCGATCACCG GCCAGGTCGG CGCGTCGCTC ATCGGCACGG ACGCCTTCCA GGAGGCGGAC
ATCGTCGGCA TCACCTTCCC GGTGACCAAG CACAGCTTCC TCGTGACGGA CCCCGACGAC
ATCCCGCGGA CCATCGCCGA GGCCTTCCAC ATCGCCTCGA CCGGTCGCCC CGGCCCGGTG
CTCGTGGACA TCGCGAAGTC CGCCATGCAG GCGAAGACGA CGTTCAGCTG GCCGAGCGAG
CTCAACCTGC CGGGCTACCA CCCGGTGACC AAGCCGCACA GCAAGCAGAT CCGCGAGGCG
GCCCGTCTGC TCGCCTCGGC ACGACGCCCC GTCCTCTACG TCGGTGGTGG CGCGATCCGC
TCCGGCGCGG CGGCCGAGCT GCGCAAGCTG GTCGACCTCT CCGGAGCGGC TGCGGTCACG
ACCCTCATGG CCCGCGGCGC GCTGCCCGAC TCGCACCCGC AGAACCTCGG CATGCCCGGC
ATGCACGGCA CGGTCCCGGC CGTGTCCGCC CTGCAGAAGG CCGACCTGGT CTTCGCGCTC
GGCGCGCGCT TCGACGACCG CGTCACCGGC AAGCTCTCGA GCTTCGCCCC GCACGCGACG
ATCATCCACG CGGACATCGA CCCGGCAGAG ATCGGCAAGA ACCGTGCGGT CGACGTGCCG
ATCGTCGGAG ACCTCAAGGA GGTCATCGCC GACCTGCTCC CCGAGCTCGC CCGCGAGCAG
GAGACCCACG GCAAGCCGGA CCTCGAGGCC TGGTGGCGCC AGATCGACTC GTGGCGCGAG
ACATACCCCC TCGGCTTCAC GGAGCCCGAG GACGGTCACC TCGCCCCGCA GCACATCATC
AGCCGCCTCG GCGAGATCTC GGGCCCGGAC AGCATCTACG TGTCGGGCGT GGGGCAGCAC
CAGATGTGGG CCTCGCAGTT CATCCGCTAC GAGCGCCCCA ACACGTGGCT CAACTCGGGC
GGCCTGGGCA CCATGGGCTA CTCGATCCCG GCCGCGATGG GAGCCAAGGT CGGTCAGCCC
GACCGCACCG TCTGGGCGAT CGACGGCGAC GGCTGCTTCC AGATGACCAA CCAGGAGCTC
GCGACCTGCT CGATCAACGA CATCCCCATC AAGGTGGCGC TGATCAACAA CTCCTCGCTC
GGCATGGTCC GCCAGTGGCA GACGCTGTTC TACGAGTCCC GGTACTCGAA CACCGACCTG
CACACAGGGC ACGGCACCCG CCACATCCCC GACTTCGTCA AGCTCGCGGA CGCCTACGGC
TGCGTCGGCA TCCGCGTCGA GCACGCGAAC GAGGTCGACG CGGCGATCAA GCGCGCGGAG
CAGATCAACG ACCAGCCCGT GGTCATCGAC TTCCACGTGT CGCGCGACGC CATGGTGTGG
CCGATGGTGG CCGCCGGCGT GAGCAACGAC GACATCCAGT ACGCACGCGG CATCTCGCCC
GCGTGGGACC GCGAAGACTG A
 
Protein sequence
MVQGPTPAPP RGGAPAGAAP AATPSAPKPA PGDAVRRPRT DVSTAEVTGA ESIVRSLEAA 
GVETVFGIPG GAILPTYDPL MDSKKIRHIL VRHEQGGGHA ASGYAHATGR VGVTMATSGP
GATNLVTPIA DANMDSIPMV AITGQVGASL IGTDAFQEAD IVGITFPVTK HSFLVTDPDD
IPRTIAEAFH IASTGRPGPV LVDIAKSAMQ AKTTFSWPSE LNLPGYHPVT KPHSKQIREA
ARLLASARRP VLYVGGGAIR SGAAAELRKL VDLSGAAAVT TLMARGALPD SHPQNLGMPG
MHGTVPAVSA LQKADLVFAL GARFDDRVTG KLSSFAPHAT IIHADIDPAE IGKNRAVDVP
IVGDLKEVIA DLLPELAREQ ETHGKPDLEA WWRQIDSWRE TYPLGFTEPE DGHLAPQHII
SRLGEISGPD SIYVSGVGQH QMWASQFIRY ERPNTWLNSG GLGTMGYSIP AAMGAKVGQP
DRTVWAIDGD GCFQMTNQEL ATCSINDIPI KVALINNSSL GMVRQWQTLF YESRYSNTDL
HTGHGTRHIP DFVKLADAYG CVGIRVEHAN EVDAAIKRAE QINDQPVVID FHVSRDAMVW
PMVAAGVSND DIQYARGISP AWDRED