| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_10540 |
|---|
| Symbol | |
|---|
| ID | 8632690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1228421 |
|---|
| End bp | 1229422 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | sugar phosphate isomerase/epimerase |
|---|
| Protein accession | YP_003313837 |
|---|
| Protein GI | 269794382 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCGTC CGATCACCCT CTTCACCGGC CAGTGGGCCG ACCTGCCCTT CGAGGAGGTC
GCGGCGCTCG CGGCCGGGTG GGGATACGAC GGTCTCGAGA TCGCGTGCTG GGGAGACCAT
CTCGACCCGT GGCGGTGGGA CGACGACGAG TACGTGCAGG GACGCCTCGA CATCTTGGCG
CGGCACGGCC TCCAGGTGCA CGCGATCTCC AACCACCTCA AGGGGCAGGC GGTCTGCGAC
GACCCCATCG ACCAGCGGCA CCGCGACATC CTGCCCGACG TGGTCTGGGG AGACGGAGAC
CCGGAGGGGG TGCGCCAGCG TGCCGCCGAG GAGATGAAGC ACACCGCGCG CCTGGCAGCC
CGGCTCGGGG TGAAGACCGT GGTGGGGTTC ACGGGCTCGT CGATCTGGAA GTACGTGGCG
ATGTTCCCGC CGGTGAGCCA GGAGGCCGTC GACGCCGGGT ACCAGGACTT CGCGGACCGC
TGGAACCCGA TCCTCGACGT CTTCGACGAC GTGGGGGTGC GTTTCGCGCA CGAGGTGCAC
CCGAGCGAGA TCGCCTACGA CTACTGGACG ACCGTCCGCA CCCTGGAGGC CATCGGTCAC
CGCGAGGCCT TCGGGCTCAA CTGGGACCCG AGCCACATGG TGTGGCAGGA CATCGACCCC
GTGAGCTTCC TCTGGGACTT CAAGGACCGG ATCTACCACG TGGACTGCAA GGACACGAAG
AAGCGCATGA GCAACGGCCG CAACGGCCGG ATGGGCTCGC ACCTGGCGTG GGCCGACGGC
CGCCGCGGGT GGGACTTCAT CTCGACCGGG CACGGCGACG TCCCGTGGGA GGACGCCTTC
CGGATGCTCA ACACCATCGG GTACGCAGGG CCGATCTCCA TCGAGTGGGA GGACGCCGGC
ATGGACCGGC TGGTCGGCGC GCCCGAGGCG CTCGAGTTCG TGCGCAGGCT CGCGCTCGAC
GCACCCGAGG CTGCGTTCGA CGCGGCGTTC AGCGCGCGCT GA
|
|---|
| Protein sequence | MVRPITLFTG QWADLPFEEV AALAAGWGYD GLEIACWGDH LDPWRWDDDE YVQGRLDILA
RHGLQVHAIS NHLKGQAVCD DPIDQRHRDI LPDVVWGDGD PEGVRQRAAE EMKHTARLAA
RLGVKTVVGF TGSSIWKYVA MFPPVSQEAV DAGYQDFADR WNPILDVFDD VGVRFAHEVH
PSEIAYDYWT TVRTLEAIGH REAFGLNWDP SHMVWQDIDP VSFLWDFKDR IYHVDCKDTK
KRMSNGRNGR MGSHLAWADG RRGWDFISTG HGDVPWEDAF RMLNTIGYAG PISIEWEDAG
MDRLVGAPEA LEFVRRLALD APEAAFDAAF SAR
|
|---|
| |