Gene Sked_10510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_10510 
Symbol 
ID8632687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1224746 
End bp1225888 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content70% 
IMG OID 
Productmonosaccharide ABC transporter membrane protein 
Protein accessionYP_003313834 
Protein GI269794379 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC ACAGGACCAC ACCCCCGTCA GGGACCGGCG ACCGCACCGG TCCTCCACTC 
ACGAAGGGCG GGGCGCGCAC CTCGAGCGAT CGCCCCGACG ACGCCGGGGT CGCCCTCAGC
ACCCCCGAAC CCCTCGACAG CCCCGCCACC ACCTCGACCG ACAGTCCGCG GCACCAGGGG
CTCCCCGGCC TGCACGGCTC CGTCGGCCGC AACCTCGGCC TCGTCCTCGC GCTCGTCCTG
CTCTGCGTCG TCGGGGCCGT CACCGGCGGA GAGCGCTTCG CGAGCTTCGA CAACGCCCTC
ACCATCCTCC GGCTCGCCGC CGTGCTCGGC GTGCTGTGCA TCGGCATGAC CTTCGTCATC
ACCGGGGGAG GGATCGACCT CTCCGTCGGC TCGGTGCTCG GTCTCGCCAC GGTGTGGGCC
AGCACCCTCG CCACGCAGAC GATGGCGCGA GACACCCACT GGCTCGTCAT GGTCGGTGTC
GCGCTCGCGG TCGGTGTCGC CTGCGGGCTC ATCAACGGCA TCCTCATCGC CTACGGCAAG
ATCGTCGGCT TCATGGCGAC GCTCGCCATG ATGGTCGGCG CCCGCGGCCT CGCCGAGATC
ATCGCCAACC GCAAGACCCA GGTGGTGAGC GTCCCGGAGT TCCTCGACGT CTTCCGGGCA
TCGGTGCTGG GCGTCCCCGT GCTCGTGTGG ATGTTCGCGC TCGTGTCGGT CGCCGGCTGG
GTGCTCCTCA ACCGTACGAC CTTCGGCCGC CGCACCGTGG CCGTGGGCGG CAACCCCGAG
GCTGCGCGCC TCGCCGGGAT CAAGGTCAAG CGCCACACCA TGTACCTCTA CGCGCTCTCC
GGCCTCACCG CAGGCATCGC CGGAGTCATG ATGCTCGCCC GGACCACCGC GGGCTCGTCG
ACCAACGGCC AGATGTACGA GCTCGACGCC ATCGCGGCCG TCGTCGTCGG CGGCACGCTC
CTCGCCGGAG GCCGCGGCAC CATCGTCGGC ACCGTCCTCG GTGTGCTCAT CTTCACGACC
CTCACCAACG TGTTCACGCA GAACAACATG TCCACCTCGG CGCAGGCCGT CGTCAAGGGC
GTGATCATCG TCGTGGCCGT CCTCGTCCAG CAGAGGTTCG CGACCCGCAG CCGCACCACC
TGA
 
Protein sequence
MSEHRTTPPS GTGDRTGPPL TKGGARTSSD RPDDAGVALS TPEPLDSPAT TSTDSPRHQG 
LPGLHGSVGR NLGLVLALVL LCVVGAVTGG ERFASFDNAL TILRLAAVLG VLCIGMTFVI
TGGGIDLSVG SVLGLATVWA STLATQTMAR DTHWLVMVGV ALAVGVACGL INGILIAYGK
IVGFMATLAM MVGARGLAEI IANRKTQVVS VPEFLDVFRA SVLGVPVLVW MFALVSVAGW
VLLNRTTFGR RTVAVGGNPE AARLAGIKVK RHTMYLYALS GLTAGIAGVM MLARTTAGSS
TNGQMYELDA IAAVVVGGTL LAGGRGTIVG TVLGVLIFTT LTNVFTQNNM STSAQAVVKG
VIIVVAVLVQ QRFATRSRTT