Gene Sked_10320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_10320 
Symbol 
ID8632668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1198068 
End bp1199630 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content75% 
IMG OID 
Productuncharacterized protein, probably involved in trehalose biosynthesis 
Protein accessionYP_003313815 
Protein GI269794360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCGG TCCACGACGA CGAGGACGGC AGGTTCCCAC CCATGGCAGA CGCTCGACCC 
GCACCCACGA CCACCGAGCG GCTCGACGCG CCCGACGTCC TCGACGCGGT GCGCGCCTGG
CTGCCCGACC GGCGCTGGTT CCCCACGACG GCGGACGCCA CGGCGGTGTC CCTCGTCGCC
CGGACGGACC TGGGTGTCGA CGACCGCGGT GCGCACGCGG TCGTCGACCT GCTGCGCGTG
CCCGGGACCT CGTCGTCCTC CCCGATGACG CTCCAGGTGC CGCTCGTCCT CGAGCCGGCC
GGCACCCCGC AGGCGACGGT CGACGGACGC GGCGTCGTCG CCGTCCTCGA CGACGGGGCG
CGGCTGGTCG ACGGTGCCTA CCACCCGGCC TTCGTGACCG CGTGGCTCGA GCGGGCCTCG
TGGTCCGGGT GCCCGGCCGC GACCGCGGCC CGCGACTCCG CGGGCGGCCT CGACGTCCGC
GGCCTGCACG TCCTCACCGG CGAGCAGTCC AACACCTCCG TCCTGCTCCC GGCGGTGGCC
GGCGGCTCGA TGCTCAAGGT CATCCGCGCC CTCGCCCCCG GGCAGAACCC CGACATCGTC
GTCCCGCTCG CCCTGGTCCA GGCCGGGTGG GCCGGCGTGC CCGAGCCCTA CGCGTGGAGC
GAGACCGCCG TCGAGGAGGA CCCGACGTCC GTCGGCACGG GCTCAGACGC GAGCACGAGC
ACCGCAGCAC CCCTCCCCCA GCGGTGGAGC ACGCACACGG GGGTGCTCGC CGAGCTCGTC
CCGCAGGCGC GCGACGGCTT CGAGCTCGCC TGCGACTTCG CCCGCGAGGG CCAGCCCTTC
GCCAACCCGG CCCGGGAGCT CGGGACCCAG GTCGCGCAGA TGCACAGCGC GCTGCGTCGC
GCCTTCGCCT CCGAGGTGCA CGAGGCCGAC CCGGCCTGGC TGCTCGACGC CATGCAGCGA
CGGGTGCGCT CCGCGGCAGG TGCGAGCAGC GCGGTCCGCT CACGGGTGGA CCAGATCGAC
GCGTTCCTCG AGCACATGCG CGGCGTCGCC GAGGAGGCGG TCCGGCAGGG GCGCCCGCTG
CCGCCCGTCC AGCGGATCCA CGGCGACCTG CACCTGGGTC AGGCGCTCTA CAGCCCGCAG
AAGGGCTGGC GCATCCTCGA CTTCGAGGGC GAGCCGCTGC GCCCGCTCAC CGAGCGCACC
CGTCCGGACC TGGGCGAGCG CGACGTCGCC GGGATGCTCC GGTCCTTCGA CTACGCCTCG
GCCGTCGGCG GAGCGACCTC GTCGGAGTGG GCGCGCGCAG CACGCCGTGC ATTCCTCGAG
GGCTACACCG GGTACCTCAG CGTGCCCGGA GCCCTCGGCT TCGGGCGTCC GCCGTCGCTC
GCCGACCGGG TGCTCATCCG CGACGCCTTC GAGCTCGACA AGGCCCTGTA CGAGGTGGTC
TACGAGGAGC GCAACCGCCC GGACTGGATC TCGATCCCGC TCGGGGCCGT CGACCGCGTC
CTCGGCGCCC TCCCCAGGCC CGCCACCTCG GCAGACGCCG GACCCGCCGG TCGCCGGGCA
TGA
 
Protein sequence
MAAVHDDEDG RFPPMADARP APTTTERLDA PDVLDAVRAW LPDRRWFPTT ADATAVSLVA 
RTDLGVDDRG AHAVVDLLRV PGTSSSSPMT LQVPLVLEPA GTPQATVDGR GVVAVLDDGA
RLVDGAYHPA FVTAWLERAS WSGCPAATAA RDSAGGLDVR GLHVLTGEQS NTSVLLPAVA
GGSMLKVIRA LAPGQNPDIV VPLALVQAGW AGVPEPYAWS ETAVEEDPTS VGTGSDASTS
TAAPLPQRWS THTGVLAELV PQARDGFELA CDFAREGQPF ANPARELGTQ VAQMHSALRR
AFASEVHEAD PAWLLDAMQR RVRSAAGASS AVRSRVDQID AFLEHMRGVA EEAVRQGRPL
PPVQRIHGDL HLGQALYSPQ KGWRILDFEG EPLRPLTERT RPDLGERDVA GMLRSFDYAS
AVGGATSSEW ARAARRAFLE GYTGYLSVPG ALGFGRPPSL ADRVLIRDAF ELDKALYEVV
YEERNRPDWI SIPLGAVDRV LGALPRPATS ADAGPAGRRA