Gene Sked_10300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_10300 
Symbol 
ID8632666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1194655 
End bp1195596 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content75% 
IMG OID 
Productthioredoxin domain-containing protein 
Protein accessionYP_003313813 
Protein GI269794358 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGC CAGGTGCCCC CGGTTCCCAG TTCGACGTCC GCGGAGCGGT CGACCTGTCG 
TCCCTCGGAC GGCCGTCCGC CCCGCCGCCC GGTACGCCCG GCGGCGCTCC CGCCGCGGGC
GGCTTCGTCG TCGACATCAC CGACGAGATG TTCCCGTCGG TCGTGCAGCA GTCGGCCCAG
GTCCCCGTGG TCGCGCTGCT CTGGCTGCCG ACCGACGCGG AGAACGCCCG GCTCGCGACG
ACCCTCGGCA CGCTCACGCA GGAGTACGCG GGCCGGTTCC TGCTCGCCCG CATCGACGCG
TCGGCCTACC CGCAGATCGC CCAGGCGTTC CAGGTCCAGG GCTTCCCGAC GGTCGTCGCG
ATCCTCGGGC AGCAGCCGGT GCCGCTGTTC CAGGGCGTCG CCGACGACGC GCAGATCCGC
TCCGTCCTCG ACGAGCTGCT CACCGCAGCC GAGCAGAACG GCGTCACCGG GGTCCTCGCG
CCGCCGGAGG GACAGCAGCA GGTCCCGGCA CCCGCCGCCG AGCCCGAGCC CGAGCTCCCG
CCGCTGCACC GCAAGGCCTA CGAGGCCATC GAGGCCGGCG ACCTGGAGCT GGCGGTCGCC
GCCTACGAGC AGGCGCTCCG CGAGGACCCG CGCGACCAGC TCGCCCCGGC AGGCCTGGCC
CAGGCCCGAC TCCTGCTGCG CACCCGCGAC GCCGACCTCG CGGCTGTCCG CGCCGCCGCG
GCCGAGCGTC CCACCGACGT CGAGGCCCAG CTCGCGGTCG CCGACATGGA CATCGCCGGC
GGCAAGGTCG AGGACGCGCT GGGACGGCTC ATCGAGCTGG TCCCGGGGGC CGACGACAAG
GACGTGCTCC GCAAGCGCCT CGTCGAGTAC TTCGACCTGC TCGGACCGCA GGACCCGCGC
GTCTCGCCGG CACGCCGCGC ACTGACCAAC GCGCTGTACT GA
 
Protein sequence
MSQPGAPGSQ FDVRGAVDLS SLGRPSAPPP GTPGGAPAAG GFVVDITDEM FPSVVQQSAQ 
VPVVALLWLP TDAENARLAT TLGTLTQEYA GRFLLARIDA SAYPQIAQAF QVQGFPTVVA
ILGQQPVPLF QGVADDAQIR SVLDELLTAA EQNGVTGVLA PPEGQQQVPA PAAEPEPELP
PLHRKAYEAI EAGDLELAVA AYEQALREDP RDQLAPAGLA QARLLLRTRD ADLAAVRAAA
AERPTDVEAQ LAVADMDIAG GKVEDALGRL IELVPGADDK DVLRKRLVEY FDLLGPQDPR
VSPARRALTN ALY