Gene Sked_10140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_10140 
Symbol 
ID8632650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1174430 
End bp1175677 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content74% 
IMG OID 
ProductN-acyl-D-glucosamine 2-epimerase 
Protein accessionYP_003313797 
Protein GI269794342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.215819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.404919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAC CTGCCCACAG CTGGCTGCGC ACCCCCACCC ACCTCGACTG GCTCGACGAG 
CACGCCCGCA GCCTGCTCGC CTTCGGCACC GGCTTCGTCA GCCCTGACGG CGGCGCCGGC
TGGCTCGAGG ACGACGGGTC CCTGGACGCG GAGCGCGGCG TCTTCACCTG GATCACCTGC
CGCATGGCGC ACGTCTACGG GCTCGGGGCA CTGCTCGGGG TCCCCGGCAG CCGCCCGCTG
GCCCAGGCCG CCCTCGACGC CCTGCGCGGG CGCCTCCACG ACGACGTGAA CGGCGGCTGG
TACGCGTCGA TCGCCGCCGA CGGCACCGTC GACACGACCA AGAGCGGCTA CGCGCACGCC
TTCGTGGTGC TCGCCGCGAG CACCGGCGTC GTGGCCGACC TCGAGGGTGC GCAGGAGCTG
CTCGACGACG CGCTCGAGGT GCTCGACACC CGGTTCTTCG ACGCGGAGAC CGGTCTGCAC
GTCGACGAGT GGGACGAGTC CTGGTCCGTG CTCGACCCCT ACCGCGGGGT CAACGGCAAC
ATGCACGCGG TCGAGGCCCT GCTCGCCGCG GCCGACGTCA CCGGAGACGC CCGCTGGCGC
GAGCGCGCCC TCGGCATCGC CCGCTACGTG GGCGTCGAGT GGGCACCGTC GAACGACTGG
CGCATCCCGG AGCACTTCGA CGAGGCCTGG GTCCCCCAGC CCGACCTCAA CGAGTCGACG
CCCGACGACC CCTTCAAGCC CTACGGGGCC ACCGTCGGCC ACGGCATCGA GTGGGCACGC
CTGCTCCTCA ACCTCTGGGC GGGCCTCGGC GAGGACGCCC CCGACTGGCT GGTGCCCGCG
GCACGCGAGC TCTACGACCG CGCGGTCACC GACGGCTGGC GCGAGAGCAC CCCGGGCGCC
CACGGCTTCG TCTACACGAC CGGCTGGGAC GGCGAGCCCG TCGTCGAGAC GCGCATGCAC
TGGGTCGCCG CGGAGGCCGT CGGTGCCGCC GCGTCGCTCG CGAAGGCGAC CGGCGACGCC
CGGTACGACG ACGAGTACGC CCGGTGGTGG GACCACGTGG CCGCGGTCTT CCTCGACGGA
GAGCACGGCT CGTGGCACCA CGAGCTCGAC GCGAGCAACA CGCCGACGGC CAAGGTGTGG
CCCGGCAAGC CCGACATCTA CCACGCGTTC CAGGCCACCC TGTTCCCGCA GCTCCCCCTC
GCCCCGTCGC TCTCGGTCGC CCTGCGCGAC GGGCTGCTGC GCAGCTGA
 
Protein sequence
MTSPAHSWLR TPTHLDWLDE HARSLLAFGT GFVSPDGGAG WLEDDGSLDA ERGVFTWITC 
RMAHVYGLGA LLGVPGSRPL AQAALDALRG RLHDDVNGGW YASIAADGTV DTTKSGYAHA
FVVLAASTGV VADLEGAQEL LDDALEVLDT RFFDAETGLH VDEWDESWSV LDPYRGVNGN
MHAVEALLAA ADVTGDARWR ERALGIARYV GVEWAPSNDW RIPEHFDEAW VPQPDLNEST
PDDPFKPYGA TVGHGIEWAR LLLNLWAGLG EDAPDWLVPA ARELYDRAVT DGWRESTPGA
HGFVYTTGWD GEPVVETRMH WVAAEAVGAA ASLAKATGDA RYDDEYARWW DHVAAVFLDG
EHGSWHHELD ASNTPTAKVW PGKPDIYHAF QATLFPQLPL APSLSVALRD GLLRS