| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_10080 |
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| Symbol | |
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| ID | 8632644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 1164821 |
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| End bp | 1166455 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | ABC-type sugar transport system, periplasmic component |
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| Protein accession | YP_003313791 |
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| Protein GI | 269794336 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCG ACGTCAACCG TCGGTCCTTC CTCGGGATGC TCGCCGCGGG TGCCGCCGTC
GTCGGCGTCC CGTCGCTGCT GTCCGGCTGC GGAGGCTCCG GGCAGGCCCC GACGACCGGT
TTTGTCGCCG CCGGCACCGA CGTCATCCCC ACCTACGTCC CGGTCGACTA CGTCACCCCG
GACTTCCCGA GCGTCAACGG CTCGACCCCC GGCTTCTCGG TCCTGCCGAC CGAGCTGGTC
CAGTCGGTCC CGACCCCGCC GGGCAAGGGC ACCGCCTTCA CCGCCATGAC CCCGCTGTGG
GGCACCATCC CGCCGAAGTC CGGCAACCAG TACTACGCCG CGGTCAACGA CCTGCTCGGC
TCGACGATCG ACTTCCAGAT CACCGACGGC AACACCTACG GCGACAAGCT CGCGACGGTG
CTCGCCTCCT CGCGCGACGT CCCGGACTGG GTCTGCGTGC CGACCTGGAA CCTGCCGCCG
CGCTTCGGCA GCGAGATCGT CGGCAACGTG TTCCAGGACC TCAGCCCGTA CCTCGGGGGC
GACAAGGTCA AGGAGTACCC GAACCTGGCC AACATCCCGA CCGACGCCTG GAAGTTCTGT
GTGTTCAACG GCAAGCTCTA CGGGCTGCCG TTCCCGGGCG AGATCCTCAC CGACGCGGTC
TTCTACCGCA AGGACGTCCT CGACGGCCTC GGCATCACGC CCGACGTGCG CTCCGGCCAG
GACCTCATCG ACCTGGCCGT CGAGCTCACC GACTCCAGCG CGGGGCGCTG GGGCACCGAG
GACCTCTGGA ACACCGCCGC GATCATCCAC GCGGTCCCGC CCAAGTGGAA GCTCGACGAC
GCCGGGAAGC TGGTGCACCG GGTCGAGAGC GAGGAGTACC GTGCGGCCCT CGAGTGGAAC
GCCGCGGTCT TCGCCGCGGG CGTGGTCCAC CCGGACGCCG TCGCCGACCA GAGCGGGGAC
GCCAAGCAGC GCTTCCAGTC CGGCAAGACC GTGATCGCCA ACGACGGCCT CGGCTCGTGG
CACGAGGCGC TGCGCGACAA CCTCGCGAGC AACCCCGACT TCTGGCAGGA GCCGTTCCTG
CCCTTCGCCG CCGACGGCGG GACGCCGGTC CTGTTCAAGG GCAACCCGGC CAACATCTTC
TCGTTCCTCA AGAAGTCCGA CGACGAGGCG CGCATCAAGG AGCTGCTCTC GCTCGCCGAC
GTCCTCGCGG CGCCCTTCGG CACGACCGAG TTCGACGTGG TCGCCAACGG CGTCGAGGGC
GTGCACTTCA CCCGGGACGA CCAGGGGATG CCGGTCCCGA CCGACCTCGC GGCGACCGAG
CTCCAGCCGA CCTACATGTT CCTCGTCGAC GGGCCGATCG CGAACACCCG CGTCCAGTAC
CCCGGGTACG TCGAGGCGTC GTCGAACTGG CAGGCCGCTG CCTCGGAGTT CATCACCGAC
CCGGTGTTCT ACGGCCAGCA GATCTCCGAG CCCCAGCAGT ACGCCTCGAT CGGGCAGCCC
TTCGTCGACC TCGAGAAGGA CATCTCGCGC GGGCGCAAGT CCATCTCCGA CCTCGACTCC
GCCGTGGAGA CGTGGAAGTC CTCGGGCGGC GACGAGCTGC GCGCCTTCTA CCAGGACATC
CTGGACCAGC AGTGA
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| Protein sequence | MDIDVNRRSF LGMLAAGAAV VGVPSLLSGC GGSGQAPTTG FVAAGTDVIP TYVPVDYVTP
DFPSVNGSTP GFSVLPTELV QSVPTPPGKG TAFTAMTPLW GTIPPKSGNQ YYAAVNDLLG
STIDFQITDG NTYGDKLATV LASSRDVPDW VCVPTWNLPP RFGSEIVGNV FQDLSPYLGG
DKVKEYPNLA NIPTDAWKFC VFNGKLYGLP FPGEILTDAV FYRKDVLDGL GITPDVRSGQ
DLIDLAVELT DSSAGRWGTE DLWNTAAIIH AVPPKWKLDD AGKLVHRVES EEYRAALEWN
AAVFAAGVVH PDAVADQSGD AKQRFQSGKT VIANDGLGSW HEALRDNLAS NPDFWQEPFL
PFAADGGTPV LFKGNPANIF SFLKKSDDEA RIKELLSLAD VLAAPFGTTE FDVVANGVEG
VHFTRDDQGM PVPTDLAATE LQPTYMFLVD GPIANTRVQY PGYVEASSNW QAAASEFITD
PVFYGQQISE PQQYASIGQP FVDLEKDISR GRKSISDLDS AVETWKSSGG DELRAFYQDI
LDQQ
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