| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_10030 |
|---|
| Symbol | |
|---|
| ID | 8632639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1158406 |
|---|
| End bp | 1159887 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | ATP synthase, F1 beta subunit |
|---|
| Protein accession | YP_003313786 |
|---|
| Protein GI | 269794331 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA CGTCCGTCGA AGCCACGGCC GGTTCCCAGG CTGGACCCGG CGTGGGCCGT
GTTGCCCGCG TCATCGGTCC GGTCGTCGAC ATCGAGTTCC CGGCCGACTC CATCCCCGAC
ATGTACAACG CCCTGACGGT CGAGATCGAC CTCTCGGCCC AGGGCGAGGG GGAGCAGTCC
TTCACGCTCA CCCTCGAGGT CGCCCAGCAC CTCGGTGACT CCCTCATCCG TGCCATCGCG
CTCAAGCCGA CCGACGGCCT CGTCCGCGGC GCCGTCGTCA CCGACACCGG GTCGCCCATC
AGCGTCCCCG TCGGCGACGT CACCAAGGGC CACGTCTTCG ACGTGACCGG CAACGTGCTC
AACGCGAAGC CGGGCGAGCA GATCGAGGTG ACCGAGCGCT GGCCGATCCA CCGCAAGCCC
CCGGCATTCG ACCAGCTCGA GTCGAAGACC GCGATGTTCG AGACCGGCAT CAAGGTCATC
GACCTCCTCA CCCCGTACGT CCAGGGTGGG AAGATCGGTC TCTTCGGTGG TGCAGGTGTC
GGCAAGACCG TCCTCATCCA GGAGATGATC TACCGTGTGG CCAACAACCA CAACGGTGTG
TCGGTGTTCG CCGGTGTCGG CGAGCGCACC CGTGAGGGCA ACGACCTCAT CGAGGAGATG
ACCGAGTCGG GCGTCATCAA GCAGACGGCC CTCGTCTTCG GCCAGATGGA CGAGCCGCCG
GGCACGCGTC TTCGCGTGGC CCTCTCTGCT CTGACGATGG CGGAGTACTT CCGCGACGTG
CAGAAGCAGG ACGTGCTGCT CTTCATCGAC AACATCTTCC GCTTCACGCA GGCCGGTTCC
GAGGTCTCCA CGCTGCTCGG CCGCATGCCG TCCGCCGTGG GCTACCAGCC GAACCTCGCC
GACGAGATGG GTCAGCTGCA GGAGCGCATC ACCTCGACGC GTGGTCACTC GATCACGTCG
CTCCAGGCGA TCTACGTCCC TGCCGACGAC TACACCGACC CGGCGCCGGC GACCACCTTC
GCGCACCTCG ACGCGACGAC GGAGCTCTCC CGAGAGATCG CCTCGCGCGG TCTCTACCCG
GCCGTCGACC CGCTCGCCTC GTCGTCGCGC ATCCTCGACC CCCGCTACGT GGGCCAGGCG
CACTACGACA CCGCGACGCG CGTCAAGCAG ATCCTCCAGC GCAACAAGGA GCTGCAGGAC
ATCATCGCGA TCCTCGGTGT CGACGAGCTC TCCGAGGAGG ACAAGACGGT CGTGTCGCGT
GCGCGCCGCA TCCAGCAGTT CCTCTCGCAG AACACGTACA TGGCCGAGCA GTTCACCAAC
GTGCCCGGCT CGACGGTCCC CCTCTCGGAG ACCATCGAGG CGTTCTCGAA GATCGCCGAC
GGAGAGTTCG ACCACATCTC CGAGCAGGCC TTCTTCAACA TCGGTGGGCT CGAGGACCTC
GAGCGCAACT GGGCGCGGAT CCAGAAGGAG TACGGCGTCT GA
|
|---|
| Protein sequence | MTATSVEATA GSQAGPGVGR VARVIGPVVD IEFPADSIPD MYNALTVEID LSAQGEGEQS
FTLTLEVAQH LGDSLIRAIA LKPTDGLVRG AVVTDTGSPI SVPVGDVTKG HVFDVTGNVL
NAKPGEQIEV TERWPIHRKP PAFDQLESKT AMFETGIKVI DLLTPYVQGG KIGLFGGAGV
GKTVLIQEMI YRVANNHNGV SVFAGVGERT REGNDLIEEM TESGVIKQTA LVFGQMDEPP
GTRLRVALSA LTMAEYFRDV QKQDVLLFID NIFRFTQAGS EVSTLLGRMP SAVGYQPNLA
DEMGQLQERI TSTRGHSITS LQAIYVPADD YTDPAPATTF AHLDATTELS REIASRGLYP
AVDPLASSSR ILDPRYVGQA HYDTATRVKQ ILQRNKELQD IIAILGVDEL SEEDKTVVSR
ARRIQQFLSQ NTYMAEQFTN VPGSTVPLSE TIEAFSKIAD GEFDHISEQA FFNIGGLEDL
ERNWARIQKE YGV
|
|---|
| |