Gene Sked_10020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_10020 
Symbol 
ID8632638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1157409 
End bp1158305 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID 
ProductATP synthase F1 subcomplex gamma subunit 
Protein accessionYP_003313785 
Protein GI269794330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.871134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGGCA ACCAGCGCGT CTACAAGGCG CGGATCAAGT CGACGCAGTC GCTCAAGAAG 
ATGTTCCGTG CCCAGGAGCT CATCGCGGCG TCTCGCATCG GCAAGGCGCG TGCGCGGGTG
ACCGCGGCGC AGCCGTACGC GACCGCGATC ACGCGGGCCG TGTCGGCCGT GGCCACGCAC
TCGGACGTCA GCCACCCGCT GACGTCCGAG CGCACGGACA CCAACCGCGC CGCGGTGCTG
CTCGTCGCGT CCGACCGCGG CATGGCGGGG GCCTACTCGG CCAGCGTCAT CCGCGAGGCG
GAGCAGCTCA TCGAGCAGCT CACCGCCGAG GGCAAGGACG TCCAGCTCTA CGTCAGCGGT
CGTCGTGCGC TCGCCTACTA CCAGTTCCGC GGTCGCACGA TCGTGGGCTC CTGGACCGGT
GGGTCGGACG CTCCTGACGC CGAAGAGGCC GAGCAGATCG CCGACACGCT CCTCGAGGCG
TTCCTCGCCC CGGCCGACGA GGGCGGTGTC GCCGAGCTGC ACGTGGTGCA CACCCAGTTC
GTCAACATGG TGACCCAGCG TCCTCGGGTC ATCCGGATGC TCCCGCTCGA GATCGTCGAC
GGCGTGGCAC CCTCGGAGCC TGCAGCGGCA CTGCCGCTGT ACGACTTCGA GCCCTCGCCC
GAGGCCGTCC TCGACGGGCT GCTGCCGCGG TACGTCCGCA GCCGCATCTT CAGCTGCCTG
CTGCAGGCGG CCGCCTCGGA GCTGGCATCG CGCCAGCGGG CCATGCACAC GGCCACCGAG
AACGCCGAGG ACCTCATCCG CATGTACACC AGGCTCGCGA ACCAGGCGCG CCAGGGTGAG
ATCACCCAGG AGATCAGCGA GATCGTCTCC GGTGCCGACG CACTGGCGGC ATCGTGA
 
Protein sequence
MAGNQRVYKA RIKSTQSLKK MFRAQELIAA SRIGKARARV TAAQPYATAI TRAVSAVATH 
SDVSHPLTSE RTDTNRAAVL LVASDRGMAG AYSASVIREA EQLIEQLTAE GKDVQLYVSG
RRALAYYQFR GRTIVGSWTG GSDAPDAEEA EQIADTLLEA FLAPADEGGV AELHVVHTQF
VNMVTQRPRV IRMLPLEIVD GVAPSEPAAA LPLYDFEPSP EAVLDGLLPR YVRSRIFSCL
LQAAASELAS RQRAMHTATE NAEDLIRMYT RLANQARQGE ITQEISEIVS GADALAAS