Gene Sked_09800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_09800 
Symbol 
ID8632616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1132874 
End bp1134553 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content72% 
IMG OID 
Productarginyl-tRNA synthetase 
Protein accessionYP_003313763 
Protein GI269794308 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0453043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCCCA ACGAGCTCTC CGAAGCACTC CGCGCTGCCC TCGCCGCCAA GATCGCCGAC 
GGCACCCTGG CCCTCGACCT CGACGCTCTG CCCGAGCAGA TCCTCGTCGA GCGACCGCGC
CAGCGCGAGC ACGGAGACTG GGCCACCAAC ATCGCGCTCC AGCTGGCCAA GAAGGCAGGC
ACCCAGCCGC GCGCCCTCGC CGACGACCTC GCCGTCCGCT TCGCGGAGAC GCCCGGCGTC
AAGAGCGTCG CGGTCGCGGG CCCCGGGTTC CTCAACATCA CCCTCGACGC CGCGGCGGCG
GGCGAGCTCG CCCGCACGGT GATCGACCAG GGCGCCGGCT ACGGCCGCGG CGTGGCCGAG
GCCGGCAAGA AGGTCAACCT GGAGTTCGTC TCCGCCAACC CGACCGGTCC CATCCACATC
GGCGGCGTCC GCTGGGCCGC CGTGGGCGAC TCGCTCGCGC GCGTCCTCGA GGCGGCGGGC
GCCGAGGTGA CCCGCGAGTA CTACTTCAAC GACCACGGCG CGCAGATCGA CCGCTTCTCG
CGCTCGCTGC TCGCCCGGGC CAAGGGCGAG GACGCCCCGG AGGACGGCTA CGGCGGCCAG
TACATCCAGG ACATCGCCGA CGCGGTCCTC GCGGACGTCG CCGCCGCGGG TGGCCCGGAC
CCGCTGACGC TCCCCGACGA GGAGGCCCAG GAGGTCTTCC GGTCGATCGG CGTCGACCGC
ATGTTCACCG AGATCAAGGC CGCGCTGCAC GGCTTCGGCG TGGACTTCGA CGTGTACTTC
CACGAGGACA CGCTCCACGA GACCGGTGCT GTGGACCGCG CGATCGCGCG GTTGAAGGAC
TCTGGCCACA TGTTCGAGGC CGACGGCGCC ACCTGGCTGC GCACCACGGA CTTCGGCGAC
GACAAGGACC GCGTGGTCAT CAAGTCCGAC GGTCAGGCCG CCTACATCGC CGGCGACATC
GCCTACTACC TCGACAAGCG CGAGCGTGGC GCCGACGAGG TCATCATCAT GCTCGGCGCG
GACCACCACG GGTACGTCGG CCGCATGATG GCCGTGTGCG CGGCCTTCGG CGACCAGCCC
GGCACCAACC TGCAGATCCT CATCGGTCAG ATGGTCAACC TGCTCAAGGA CGGCGAGCCG
CTGCGCATGT CCAAGCGCGC CGGCACCGTC GTGACGCTCG AGGACCTCGT GGACGCGGTC
GGCGTCGACG CCGCGCGCTA CTCGCTCGTG CGCTCCTCGA CCGACTCGAG CCTCGACATC
GACCTCGACC TGCTGTCGAA GGCCACGAAC GAGAACCCGG TCTACTACGT CCAGTACGCC
CACGCGCGCA CCGCGAACGT CGCCCGCAAC GCGGCAGACC ACGGCGTGCG CCGCGAGGAC
GCCTTCGACC CGTCGCTGCT CACCGCGGAG ACGGAGTCGG CGCTGCTCGG CTCGCTCACC
GAGTTCCCGC GCGTCATCGC GCAGGCCGCC GAGCTCCGCG AGCCGCACCG CGTGGCTCGC
TACCTCGAGG CCCTCGCCGG GGCGTACCAC AAGTGGTACG CCGACGTCCG CGTGACGCCG
GTCGGCGACG AGGAGATCGG TGACACGCAC CGCACGCGCC TCTGGCTCAA CGACGCCACC
CGCCAGGTCC TCGCCAACGG CCTCGCGCTG CTCGGTGTGA GCGCCCCGGA GCGGATGTGA
 
Protein sequence
MTPNELSEAL RAALAAKIAD GTLALDLDAL PEQILVERPR QREHGDWATN IALQLAKKAG 
TQPRALADDL AVRFAETPGV KSVAVAGPGF LNITLDAAAA GELARTVIDQ GAGYGRGVAE
AGKKVNLEFV SANPTGPIHI GGVRWAAVGD SLARVLEAAG AEVTREYYFN DHGAQIDRFS
RSLLARAKGE DAPEDGYGGQ YIQDIADAVL ADVAAAGGPD PLTLPDEEAQ EVFRSIGVDR
MFTEIKAALH GFGVDFDVYF HEDTLHETGA VDRAIARLKD SGHMFEADGA TWLRTTDFGD
DKDRVVIKSD GQAAYIAGDI AYYLDKRERG ADEVIIMLGA DHHGYVGRMM AVCAAFGDQP
GTNLQILIGQ MVNLLKDGEP LRMSKRAGTV VTLEDLVDAV GVDAARYSLV RSSTDSSLDI
DLDLLSKATN ENPVYYVQYA HARTANVARN AADHGVRRED AFDPSLLTAE TESALLGSLT
EFPRVIAQAA ELREPHRVAR YLEALAGAYH KWYADVRVTP VGDEEIGDTH RTRLWLNDAT
RQVLANGLAL LGVSAPERM