Gene Sked_09720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_09720 
Symbol 
ID8632608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1126084 
End bp1128198 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003313756 
Protein GI269794301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.506636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAG CACCCAGCAT CCGACGCGCG ACAGCCGCGG TCCTCGCACT CGCGATCGGC 
GGTGTCCTCT CGCTCCTCGG TGCCGTCCCG GCGCAGGCGG TGGGAGCCAC GGCGGCGACC
CTCACGATCG ACGGCTCGGG ACGGGTGGGC GACGCTCTCG CCGTGCGGAC CGTGACGCCG
TGGGACCCGG CGCCCGACCT GGTCGTGTAC TCCTGGTACC GGTTCGACGA CGGCGCGGTC
GTGCACTCCG GGGCCGACGC CGGCGGTGCC GTCCTCACCC CGACCGCTGC CGAGGTCGGG
ACGATGCTCT ACGTCGAGGC GAGGGCCTTC CGCGACGGCA GCCTCATGGC GGTGGCCTCG
ACGACCGGGT CGCCGACGAT CCACCTGGGG TCCTTCTCGG GCGTGCCTGA CCCGACGGTG
TCGGGCAGCG GCGTGGTGGG GACGGACTTC ACGGCGTCGC TGAGCACCAG CGACACCACG
CCGACCCCGA CGTCCGTCGA CTACGTCTGG TACCGCGTCG ACACCGGTGC GGTCGTGCAG
ACCGGTGGCA GCACGCTGAG GGCGACCTCG TCGCTCGTCG GGACCGCGGT CTACGCGATC
GCGACCGTCC GGGCGCCCGA CACCTCGCCC TACACGACCT CCAACTCGCC GTTCTCCAGC
GCGGTGCGCC TGGCCGAGTT CGCGCACGTC CCGGCTCCGT CGGTCACGGG GACCGGGATC
GTGGGGTCGA CATACACGGC GTCGCTCGAC GTCGCCGGGA TCACCCCTGT CCCGCAGACC
GTGGCCTACA CCTGGCACCG TGCCGACACG GGCGAGGTCG TCCAGTCCGG TGGCAGCACC
TTCGTCGCCC CCTCCGCGCT GCTCGGGACC CCGGTCTACG TCGTCGCCAC GCTGTCCGCG
GACGGCGCCT CGCCGTACAC GACCACCAAC TCCGCCTTCT CCAGCACGGT GCGCCTCGCG
GAGTTCGACC AGGTGCCCGT GCCTGCGGTG TCCGGCAGCG GGATGCTGGG GACCGCCTTC
ACGGCGACCC TCGACGTCAC CGGCCTCACC CCGGTGCCCG TGTCGGTCGA GTACGTCTGG
CACCGCGCGG ACACGGGTGC TGTCGTGCAG GCCTCGGGGT CGACTTTCGT CCCGACCGCA
GCCCTCGTGG GCACGCCGGT CTACGTGGTC GCCACCCTCC GCGCGCCCGG GACGTCCCCG
TACACGACCC CCAACTCGTC GTTCTCGAGC ACGGTGCGCC TCGCGGAGTT CTCACCCGGT
GCGCCTCCGG TGCTGGTCGG TCAGCACACC CTCGGTGGCA CCCTCGTCGC GACGCTCGAC
ACGAGCGCCT GGACGCCGCG ACCGGAGTCC TTCGACTACC AGTGGTATCT CGAGGACGGG
ACGCCGGTCG AGGGCGAGAC CGGGGCGGTG CTGCCGATGA CGGAGGGCCT GGTGGGAGAG
GTCGTGTACG TCCTCGCGAC GGCGCACGCC GTCGACCACC AGCCGTACGT CGTCGCGTCG
GCACCGAGCG GTCGCATCGC CCGACCCGAC CTCGCGCTGG TCGGTGCACC TGCCGGGGGC
GTCGCAGCAG CGGTGGTCGG AGGAACCGTC GACCTCAGTG TCGCAGGGCT GCTGTTCAGC
ACGGACTACC AGGTCGAGCT GCACTCGACG CCCGTCCCGC TCGGGACGGT GACCTCCACG
AGCGAGGGGA CGCTCTCGGC GAGGTTCGCG ATCCCGTCCG ACACCCCGAC GGGCCGGCAC
CACCTCGTCC TGCTGCTGGA CGGCGTCGAG GCAGGGCGCG TCCCGCTCGA CGTCACAGCA
GCTGAGGTCC CCTCGCCCGA GGAGCCGACG CCCGGTACCC CGACGCCCGG TACCCCGACG
CCGGGGACGC CGACGCCTGA GGTTCCGCAG GTCCCCGTCC CGCAGGTCCC CGTCCCGGTC
GCACCGGTGG CCCTTCCCGC GGCTCCGGCA GCAGCGCCTG CGGCGCACCT CTCCGGCGGC
TCGGCCACGT CGTCGCCGAC CCTCGCGAGC ACCGGTGCGG ACTCGAGCGT GCTCGGGCTG
CTCGCGACAC TGGTGGCGCT CACGACGGGC GTCGCTGCAG TCCTGGCCTC GCGAGCGCGC
CGCGCCCACC GCTGA
 
Protein sequence
MTRAPSIRRA TAAVLALAIG GVLSLLGAVP AQAVGATAAT LTIDGSGRVG DALAVRTVTP 
WDPAPDLVVY SWYRFDDGAV VHSGADAGGA VLTPTAAEVG TMLYVEARAF RDGSLMAVAS
TTGSPTIHLG SFSGVPDPTV SGSGVVGTDF TASLSTSDTT PTPTSVDYVW YRVDTGAVVQ
TGGSTLRATS SLVGTAVYAI ATVRAPDTSP YTTSNSPFSS AVRLAEFAHV PAPSVTGTGI
VGSTYTASLD VAGITPVPQT VAYTWHRADT GEVVQSGGST FVAPSALLGT PVYVVATLSA
DGASPYTTTN SAFSSTVRLA EFDQVPVPAV SGSGMLGTAF TATLDVTGLT PVPVSVEYVW
HRADTGAVVQ ASGSTFVPTA ALVGTPVYVV ATLRAPGTSP YTTPNSSFSS TVRLAEFSPG
APPVLVGQHT LGGTLVATLD TSAWTPRPES FDYQWYLEDG TPVEGETGAV LPMTEGLVGE
VVYVLATAHA VDHQPYVVAS APSGRIARPD LALVGAPAGG VAAAVVGGTV DLSVAGLLFS
TDYQVELHST PVPLGTVTST SEGTLSARFA IPSDTPTGRH HLVLLLDGVE AGRVPLDVTA
AEVPSPEEPT PGTPTPGTPT PGTPTPEVPQ VPVPQVPVPV APVALPAAPA AAPAAHLSGG
SATSSPTLAS TGADSSVLGL LATLVALTTG VAAVLASRAR RAHR