| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_09490 |
|---|
| Symbol | |
|---|
| ID | 8632585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1095626 |
|---|
| End bp | 1096267 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma subunit, ECF family |
|---|
| Protein accession | YP_003313733 |
|---|
| Protein GI | 269794278 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.198222 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGACTG ACGACACCAA CCGCGCGCCC GAGGCCGAGG GCGACGCCGA GCGGACCCGA
CGGTTCGAGC GCGACGCGCT CGCGCACCTC GACCAGCTCT ACTCCGCCGC GCTGCGGATG
ACCCGCAACC CGAGCGACGC CGAGGACCTG GTCCAGGAGA CCTTCGCCAA GGCGTTCGCC
GCGTTCCACC AGTACCGGCC GGACACGAAC CTCAAGGCGT GGCTGTACCG GATCCTCACG
AACACGTTCA TCAACACGTA CCGCAAGAAG CAGCGCGAGC CGCTGCAGTC TGCGGCCGAG
GACGTCGAGG ACTGGCAGAT CGCCCGCGCC GCGTCGCACA CGTCGACCGG GCTGCGCTCG
GCCGAGGCCG AGGCGCTGGA CCGGCTGCCC GACTCGGACG TCAAGCGGGC GCTCCAGGAG
ATCCCGGAGG ACCGCCGGAT CGCGGTGTAC CTCGCGGACG TCGAGGGGTT CCCGTACAAG
GAGATCGCCG AGATCATGGG CACGCCGATC GGCACCGTGA TGTCGCGGCT GCACCGCGGT
CGCGGCCAGC TGCGGGGGCT GCTGAACGAC TACGCGGCAG ACCGCGGCTT CTCCGGGGCC
GACCGCACCA AGAGCACGAC CGGCACGAAG GGGGAACGGT GA
|
|---|
| Protein sequence | MMTDDTNRAP EAEGDAERTR RFERDALAHL DQLYSAALRM TRNPSDAEDL VQETFAKAFA
AFHQYRPDTN LKAWLYRILT NTFINTYRKK QREPLQSAAE DVEDWQIARA ASHTSTGLRS
AEAEALDRLP DSDVKRALQE IPEDRRIAVY LADVEGFPYK EIAEIMGTPI GTVMSRLHRG
RGQLRGLLND YAADRGFSGA DRTKSTTGTK GER
|
|---|
| |