Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_09420 |
Symbol | |
ID | 8632578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1086663 |
End bp | 1089458 |
Gene Length | 2796 bp |
Protein Length | 931 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | protein translocase subunit secA |
Protein accession | YP_003313726 |
Protein GI | 269794271 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.915131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTGCGA TCCTCGACAA GGTCCTACGT TTCGGCGAGG GCCGGATCGT CAAGAAGCTG TCTGGCTTGG CGAAGCAGGT CAACGCCCTC GAAGACAGCT TCGAGGCGCT GACCGACGAA GAGCTCCGCG AGGAGACCGA CCGCTTCAAG GAGCGGATCG AGCAGGGCGC GACCCTCGAC GAGCTCCTCC CCGAGGCCTT CGCCGCGGTC CGTGAGGCCT CGCGCCGCAC CCTCGGGCAG CGTCACTTCG ACGTCCAGCT CATGGGCGGG GCCGCGCTCC ACCTCGGCAA CATCGCCGAG ATGAAGACCG GTGAGGGCAA GACCCTCGTC GCGACGCTCC CCGCGTACCT CAACGCCCTC TCGGGCGAGG GCGTCCACGT GGTCACGGTC AACGACTACC TCGCCAAGTA CCAGAGCGAG ATCATGGGCC GCGTGTTCCG GTTCCTCGGT CTGAGCACCG GGTGCATCCT GTCCGGGCAG ACGCCGGCCG AGCGCCGCGA GCAGTACGCC AAGGACATCA CCTACGGCAC GAACAACGAG TTCGGCTTCG ACTACCTCCG CGACAACATG GCGTGGTCGA CCGACGACCT CGTCCAGCGC GGCCACAACT TCGCCGTCGT CGACGAGGTC GACTCGATCC TCATCGACGA GGCACGCACG CCGCTCATCA TCTCGGGCCC CGCGTCCGGC GACACGAACA AGTGGTACGG CGAGTTCGCC CGCGTGGTTC GCCGCCTCAC CGTCGACGAG GACTACGAGG TCGACGAGAA GAAGCGCACC GTCGGCGTGC TCGAGCCCGG GATCGCCAAG GTCGAGGACT ACCTCGGCAT CGACAACCTC TACGAGTCGC TCAACACGCC GCTCATCGGG TTCCTCAACA ACGCCATCAA GGCCAAGGAG CTCTTCAAGC GCGACAAGGA CTACGTCGTC ATCAAGGGCG AGGTGCTCAT CGTCGACGAG CACACCGGCC GTATCCTCGC CGGCCGCCGC TACAACGAGG GCATGCACCA GGCGATCGAG GCGAAGGAGG GCGTGGCCAT CAAGGCCGAG AACCAGACCC TCGCGACGAT CACCCTGCAG AACTACTTCC GCCTGTACTC CAAGCTCGGC GGCATGACCG GTACCGCTGA CACCGAGGCG GCCGAGTTCC AGGGCACCTA CAAGCTCGGC GTCGTGCCCA TCCCGACCAA CCGCATCATG CAGCGCATCG ACCAGCCCGA CCTCATCTAC AAGAGCGAGA ACGCGAAGTT CGACGCCGTG GTCGAGGACA TCGTCGAGCG CCACGCGGCC GGCCAGCCGG TCCTCGTGGG CACCACGAGC GTCGAGAAGT CCGAGCTCCT CGCGTCCAAG CTCAAGAAGC AGGGCGTGCC GCACGAGGTC CTCAACGCGA AGCAGCACGA GCGCGAGGCG TCGATCGTCG CGCTCGCCGG CCGCAAGGGC GCCGTGACCG TCGCGACCAA CATGGCCGGT CGAGGCACCG ACATCATGCT CGGCGGCAAC GCCGAGTTCC TCGCGATCGC CGACCTCAAG ACGCGCGGGC TCGACGCCGC CGAGACCCCG GAGGAGTACG AGGCCGCGTG GCCCGACGCC CTCGAGGCCG CCAAGAAGGC CGTGGCCGAC GAGCACGACG AGGTCGCCGA GCTCGGCGGG CTCTACGTCC TGGGCACCGA GCGGCACGAG TCGCGACGCA TCGACAACCA GCTGCGTGGC CGCTCCGGCC GTCAGGGCGA CCCGGGCGAG TCCCGGTTCT ACCTGTCGAC CCAGGACGAC CTCATGCGCC TGTTCGGCAG CGCGCTCGCC GAGTCGATGA TGCAGCGCTT CCCGGACGAC ATGCCGCTCG AGTCGAAGAT CGTCACCCGC GGCATCGCCT CGGCGCAGGG TCAGGTCGAG AGCCGCAACT TCGAGATCCG CAAGAACGTC CTCAAGTACG ACGACGTCCT GTCCCGTCAG CGCTCGGTCA TCTACGACGA GCGTCGTCGC GTGCTCGACG GCGAGGACAT GGCCGAGCAG ATCCAGCACT TCCTCAAGGA CGTGCTCACG GCCTACGTCG CGGGCGCCAC GGCAGCCGGG CACCCGGACT CCTGGGACCT CGACGGCCTC TGGACCGCCC TCAAGGCCGT CTACCCCGTG TCGATCACCG TCGAGGAGGT CGTCCAGCAG GCCGGCGGCG TCGACGCGCT GACCCACGAC CTCATCCTCG CCGAGGTGCT CTCCGACGCG CAGCACGCGT ACACCTCGCG CGAGACCGAG CTGGGCGAGT CGAACATGCG CCAGCTCGAG CGTCGTGTCG TGCTCTCGGT CCTCGACCGC AAGTGGCGCG AGCACCTCTA CGAGATGGAC TACCTCAAGG AGGGCATCGG CCTGCGTGCC ATGGCCCAGC GCGACCCGCT CGTCGAGTAC CAGCGCGAGG GGTTCCTGCT GTTCCAGGCG ATGACCGAGG CCATCAAGGA GGAGTCGGTC GGCTACCTCT TCAACCTCGA GGTCAAGGTC GAGACGGCCC CGGTCGTGAC GGCGGCCGGC GCGGCCGCTG CGGCAGGTAC CGCCGCGGCG CAGGCACTCG GGGCTGCCGG TGCGGCTGCG GCCGACACCC AGCCCGCCGA GGAGGGCGAG CAGGTGCTCG TCGCCAAGGG GCTGGACGGT CCTGACCGTC AGGTCCCGCT GAGCTACACC GCCCCGAGCG AGGACGGCGA CGGCGCTGTG GTGACCGGGG CCAACGGTGC GACCACAGCC GTGGCCGCCG GCGACGACGC CGCGGGCAAC CGCGAGGAGC GCCGCAAGGC CAAGAAGAAG AAGTAG
|
Protein sequence | MAAILDKVLR FGEGRIVKKL SGLAKQVNAL EDSFEALTDE ELREETDRFK ERIEQGATLD ELLPEAFAAV REASRRTLGQ RHFDVQLMGG AALHLGNIAE MKTGEGKTLV ATLPAYLNAL SGEGVHVVTV NDYLAKYQSE IMGRVFRFLG LSTGCILSGQ TPAERREQYA KDITYGTNNE FGFDYLRDNM AWSTDDLVQR GHNFAVVDEV DSILIDEART PLIISGPASG DTNKWYGEFA RVVRRLTVDE DYEVDEKKRT VGVLEPGIAK VEDYLGIDNL YESLNTPLIG FLNNAIKAKE LFKRDKDYVV IKGEVLIVDE HTGRILAGRR YNEGMHQAIE AKEGVAIKAE NQTLATITLQ NYFRLYSKLG GMTGTADTEA AEFQGTYKLG VVPIPTNRIM QRIDQPDLIY KSENAKFDAV VEDIVERHAA GQPVLVGTTS VEKSELLASK LKKQGVPHEV LNAKQHEREA SIVALAGRKG AVTVATNMAG RGTDIMLGGN AEFLAIADLK TRGLDAAETP EEYEAAWPDA LEAAKKAVAD EHDEVAELGG LYVLGTERHE SRRIDNQLRG RSGRQGDPGE SRFYLSTQDD LMRLFGSALA ESMMQRFPDD MPLESKIVTR GIASAQGQVE SRNFEIRKNV LKYDDVLSRQ RSVIYDERRR VLDGEDMAEQ IQHFLKDVLT AYVAGATAAG HPDSWDLDGL WTALKAVYPV SITVEEVVQQ AGGVDALTHD LILAEVLSDA QHAYTSRETE LGESNMRQLE RRVVLSVLDR KWREHLYEMD YLKEGIGLRA MAQRDPLVEY QREGFLLFQA MTEAIKEESV GYLFNLEVKV ETAPVVTAAG AAAAAGTAAA QALGAAGAAA ADTQPAEEGE QVLVAKGLDG PDRQVPLSYT APSEDGDGAV VTGANGATTA VAAGDDAAGN REERRKAKKK K
|
| |