Gene Sked_09410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_09410 
Symbol 
ID8632577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1084355 
End bp1086520 
Gene Length2166 bp 
Protein Length721 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC-type multidrug transport system, ATPase and permease component 
Protein accessionYP_003313725 
Protein GI269794270 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.129131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCGC GCAGGTCTGA GAAGAAGAGC GCGGCAGCAG CCGGTCAGCA GCGCGCGGCC 
ACGACGGTCG TCGACGGGGC AGACGGTGCA GAGGGTGTCG ACGACCTCGA GCCCGAGTAC
GTCCCCACCG AGATGGACGG CGACATGTTC GGCGGCGCGC CCGCCAAGAA GGCGCAGCAC
TTCTGGCCGT CGGCCAAGCG CCTCGTCGGC CTGCTCGCCC CCGAGCGGGT CCGGATGTCG
GTGGTCGTCG CGCTCGTCGT CGTCTCCGTC GTGCTCACGG TCATCGCGCC GCGGATCCTC
GGCCGGGCGA TGGACACCAT CTTCAACGGC GTGCTCGGCG CCCGGCTGCC CGAGGGCGTC
CCCCTCGAGA GCGTCGTCGC CGACGCGCGG GCGGAGGGAA ACGACCAGTT CGCCGACCTG
CTCTCGAACG CCGACATCGT GCCCGGCCAG GGCATAGACT TCGACCGGCT CGGCCGGCTG
ATCCTCGTGG TGCTGGCGCT GTACGTGGTC GCGTCGATCC TCAGCTGGGC CCAGGGGTAC
ATCCTCAACG GCCTCGTCAT GCGCGTGGTG TACCGCCTGC GCCAGGACAT CGAGGACAAG
ATCAACAGGC TGCCGCTCAG CTACTTCGAC ACCCGTCAGC GCGGCGACCT CATGTCCCGG
GTCACCAACG ACGTCGACAA CATCCAGGCG GCGCTCCAGC AGGCCTTCTC CCAGCTGGTG
CAGTCGGTCC TCACGGTGCT GGGCATCACG GCCATGATGT TCATCGTGTC GTGGCAGCTG
GCGCTCATCG CGCTCATCGC GCTGCCGCTC TCCGGCGTCA TCGCCGGCGT GATCGGCACG
CGGTCGCAGA AGCTCTTCGC CGCCCAGTGG AAGAACACCG GCTCGCTCAA CGGCCACGTC
GAGGAGACGT ACTCCGGGCT CGAGCTGGTC CGCAGCTTCG GCCGCGACGA GGAGATGCTC
GAGGAGTTCG ACGAGCGCAA CGAGAAGCTC TACCAGGCGT CCTTCGGTGC GCAGTTCGTG
TCGGGCATGA TCATGCCGGC CATGACCTTC GTGTCGTACC TGTCCTACGT GCTCATCGCC
GTGGTCGGTG GGCTCCGTGT CGCCTCCGGG CAGATCACGC TCGGCGACGC GACGGCGTTC
ATCCAGTACT CGCGGGAGTT CTCGCAGCCG CTCGGGCAGA TCGCCGGGAT GGCCAACATG
CTGCAGTCGG GCGTGGCCTC GGCCGAGCGC ACCTTCGAGC TCCTCGACGC CGACGAGCAG
GACCCCGAGC GGGCCACCGC GACGCTGCCC GAGCGCACCG AGGGGCTGGT CCAGCTCGAG
GACGTCTCCT TCAGCTACGA CCCCACGACG CCGCTCATCG AGCACCTGTC GTTCTCGGCC
CAGCCCGGTC ACACGGTCGC GATCGTCGGC CCGACCGGCG CGGGGAAGAC GACGCTCGTC
AACCTCATCA TGCGGTTCTA CGAGCTGACC GGCGGTCGGA TCCTCCTCGA CGGGGTGGAC
ATCACCGCGC TGAGCCGCGG CGAGCTGCGG TCCCAGGTGG GCATGGTGCT CCAGGACGCC
TGGCTGTTCG AGGGGACCAT CCGCGAGAAC ATCCGCTACG GGCGCCTCGA CGCGACCGAC
GACGAGGTCG TCGCCGCGGC GGAGGCGACC ATGGTCGACC GCTTCGTCCG CCAGCTCCCC
GACGGGTACG ACACCGTGCT CGACGCGGAC GGCGGCAGCG TCTCGGCGGG GGAGCGCCAG
CTCCTCACCA TCGCGCGGGC GTTCATCGCC AACCCGTCGC TGCTCATCCT CGACGAGGCG
ACCTCGTCGG TCGACACCCG CACGGAGCTG CTGGTCCAGC ACGCGATGGC AGCGCTGCGG
ACCGACCGCA CCTCGTTCGT CATCGCGCAC CGTCTGTCCA CCATCCGTGA CGCCGACACC
ATCCTCGTCA TGGAGGACGG CCGGATCGTC GAGACGGGCA CGCACGACGG GCTGCTCGAG
CAGGGCGGGG CCTACTACCG CCTCTACATG ACGCAGTTCC GCGGCGAGCA CACCGCCGAG
GACGAAGGCG ACGCGCACGG GGCCGACAGT GGCGACGGTG GCGACGGCAG CAGCGGGAGC
ACCGGCTCGA CCGTCTCCGC GGGAGCGGCA CCTGTCGACG TCGAGCGCCC GAGCGACGCG
GTCTGA
 
Protein sequence
MMARRSEKKS AAAAGQQRAA TTVVDGADGA EGVDDLEPEY VPTEMDGDMF GGAPAKKAQH 
FWPSAKRLVG LLAPERVRMS VVVALVVVSV VLTVIAPRIL GRAMDTIFNG VLGARLPEGV
PLESVVADAR AEGNDQFADL LSNADIVPGQ GIDFDRLGRL ILVVLALYVV ASILSWAQGY
ILNGLVMRVV YRLRQDIEDK INRLPLSYFD TRQRGDLMSR VTNDVDNIQA ALQQAFSQLV
QSVLTVLGIT AMMFIVSWQL ALIALIALPL SGVIAGVIGT RSQKLFAAQW KNTGSLNGHV
EETYSGLELV RSFGRDEEML EEFDERNEKL YQASFGAQFV SGMIMPAMTF VSYLSYVLIA
VVGGLRVASG QITLGDATAF IQYSREFSQP LGQIAGMANM LQSGVASAER TFELLDADEQ
DPERATATLP ERTEGLVQLE DVSFSYDPTT PLIEHLSFSA QPGHTVAIVG PTGAGKTTLV
NLIMRFYELT GGRILLDGVD ITALSRGELR SQVGMVLQDA WLFEGTIREN IRYGRLDATD
DEVVAAAEAT MVDRFVRQLP DGYDTVLDAD GGSVSAGERQ LLTIARAFIA NPSLLILDEA
TSSVDTRTEL LVQHAMAALR TDRTSFVIAH RLSTIRDADT ILVMEDGRIV ETGTHDGLLE
QGGAYYRLYM TQFRGEHTAE DEGDAHGADS GDGGDGSSGS TGSTVSAGAA PVDVERPSDA
V