Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_09410 |
Symbol | |
ID | 8632577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1084355 |
End bp | 1086520 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | ABC-type multidrug transport system, ATPase and permease component |
Protein accession | YP_003313725 |
Protein GI | 269794270 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.129131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGCGC GCAGGTCTGA GAAGAAGAGC GCGGCAGCAG CCGGTCAGCA GCGCGCGGCC ACGACGGTCG TCGACGGGGC AGACGGTGCA GAGGGTGTCG ACGACCTCGA GCCCGAGTAC GTCCCCACCG AGATGGACGG CGACATGTTC GGCGGCGCGC CCGCCAAGAA GGCGCAGCAC TTCTGGCCGT CGGCCAAGCG CCTCGTCGGC CTGCTCGCCC CCGAGCGGGT CCGGATGTCG GTGGTCGTCG CGCTCGTCGT CGTCTCCGTC GTGCTCACGG TCATCGCGCC GCGGATCCTC GGCCGGGCGA TGGACACCAT CTTCAACGGC GTGCTCGGCG CCCGGCTGCC CGAGGGCGTC CCCCTCGAGA GCGTCGTCGC CGACGCGCGG GCGGAGGGAA ACGACCAGTT CGCCGACCTG CTCTCGAACG CCGACATCGT GCCCGGCCAG GGCATAGACT TCGACCGGCT CGGCCGGCTG ATCCTCGTGG TGCTGGCGCT GTACGTGGTC GCGTCGATCC TCAGCTGGGC CCAGGGGTAC ATCCTCAACG GCCTCGTCAT GCGCGTGGTG TACCGCCTGC GCCAGGACAT CGAGGACAAG ATCAACAGGC TGCCGCTCAG CTACTTCGAC ACCCGTCAGC GCGGCGACCT CATGTCCCGG GTCACCAACG ACGTCGACAA CATCCAGGCG GCGCTCCAGC AGGCCTTCTC CCAGCTGGTG CAGTCGGTCC TCACGGTGCT GGGCATCACG GCCATGATGT TCATCGTGTC GTGGCAGCTG GCGCTCATCG CGCTCATCGC GCTGCCGCTC TCCGGCGTCA TCGCCGGCGT GATCGGCACG CGGTCGCAGA AGCTCTTCGC CGCCCAGTGG AAGAACACCG GCTCGCTCAA CGGCCACGTC GAGGAGACGT ACTCCGGGCT CGAGCTGGTC CGCAGCTTCG GCCGCGACGA GGAGATGCTC GAGGAGTTCG ACGAGCGCAA CGAGAAGCTC TACCAGGCGT CCTTCGGTGC GCAGTTCGTG TCGGGCATGA TCATGCCGGC CATGACCTTC GTGTCGTACC TGTCCTACGT GCTCATCGCC GTGGTCGGTG GGCTCCGTGT CGCCTCCGGG CAGATCACGC TCGGCGACGC GACGGCGTTC ATCCAGTACT CGCGGGAGTT CTCGCAGCCG CTCGGGCAGA TCGCCGGGAT GGCCAACATG CTGCAGTCGG GCGTGGCCTC GGCCGAGCGC ACCTTCGAGC TCCTCGACGC CGACGAGCAG GACCCCGAGC GGGCCACCGC GACGCTGCCC GAGCGCACCG AGGGGCTGGT CCAGCTCGAG GACGTCTCCT TCAGCTACGA CCCCACGACG CCGCTCATCG AGCACCTGTC GTTCTCGGCC CAGCCCGGTC ACACGGTCGC GATCGTCGGC CCGACCGGCG CGGGGAAGAC GACGCTCGTC AACCTCATCA TGCGGTTCTA CGAGCTGACC GGCGGTCGGA TCCTCCTCGA CGGGGTGGAC ATCACCGCGC TGAGCCGCGG CGAGCTGCGG TCCCAGGTGG GCATGGTGCT CCAGGACGCC TGGCTGTTCG AGGGGACCAT CCGCGAGAAC ATCCGCTACG GGCGCCTCGA CGCGACCGAC GACGAGGTCG TCGCCGCGGC GGAGGCGACC ATGGTCGACC GCTTCGTCCG CCAGCTCCCC GACGGGTACG ACACCGTGCT CGACGCGGAC GGCGGCAGCG TCTCGGCGGG GGAGCGCCAG CTCCTCACCA TCGCGCGGGC GTTCATCGCC AACCCGTCGC TGCTCATCCT CGACGAGGCG ACCTCGTCGG TCGACACCCG CACGGAGCTG CTGGTCCAGC ACGCGATGGC AGCGCTGCGG ACCGACCGCA CCTCGTTCGT CATCGCGCAC CGTCTGTCCA CCATCCGTGA CGCCGACACC ATCCTCGTCA TGGAGGACGG CCGGATCGTC GAGACGGGCA CGCACGACGG GCTGCTCGAG CAGGGCGGGG CCTACTACCG CCTCTACATG ACGCAGTTCC GCGGCGAGCA CACCGCCGAG GACGAAGGCG ACGCGCACGG GGCCGACAGT GGCGACGGTG GCGACGGCAG CAGCGGGAGC ACCGGCTCGA CCGTCTCCGC GGGAGCGGCA CCTGTCGACG TCGAGCGCCC GAGCGACGCG GTCTGA
|
Protein sequence | MMARRSEKKS AAAAGQQRAA TTVVDGADGA EGVDDLEPEY VPTEMDGDMF GGAPAKKAQH FWPSAKRLVG LLAPERVRMS VVVALVVVSV VLTVIAPRIL GRAMDTIFNG VLGARLPEGV PLESVVADAR AEGNDQFADL LSNADIVPGQ GIDFDRLGRL ILVVLALYVV ASILSWAQGY ILNGLVMRVV YRLRQDIEDK INRLPLSYFD TRQRGDLMSR VTNDVDNIQA ALQQAFSQLV QSVLTVLGIT AMMFIVSWQL ALIALIALPL SGVIAGVIGT RSQKLFAAQW KNTGSLNGHV EETYSGLELV RSFGRDEEML EEFDERNEKL YQASFGAQFV SGMIMPAMTF VSYLSYVLIA VVGGLRVASG QITLGDATAF IQYSREFSQP LGQIAGMANM LQSGVASAER TFELLDADEQ DPERATATLP ERTEGLVQLE DVSFSYDPTT PLIEHLSFSA QPGHTVAIVG PTGAGKTTLV NLIMRFYELT GGRILLDGVD ITALSRGELR SQVGMVLQDA WLFEGTIREN IRYGRLDATD DEVVAAAEAT MVDRFVRQLP DGYDTVLDAD GGSVSAGERQ LLTIARAFIA NPSLLILDEA TSSVDTRTEL LVQHAMAALR TDRTSFVIAH RLSTIRDADT ILVMEDGRIV ETGTHDGLLE QGGAYYRLYM TQFRGEHTAE DEGDAHGADS GDGGDGSSGS TGSTVSAGAA PVDVERPSDA V
|
| |