Gene Sked_09180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_09180 
Symbol 
ID8632554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1048574 
End bp1049497 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content68% 
IMG OID 
ProductABC-type proline/glycine betaine transport system, periplasmic component 
Protein accessionYP_003313702 
Protein GI269794247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.195292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.352785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACC GTTCTACGCA CCGCACCGCA CTCGTCGCCG GCTCGCTCGC CGTGGCCCTC 
GGCCTCGCCG CCTGCTCCTC GGACGACAGC TCGGCCGAGG ACGCCCCCCG TCTCGACAAC
GGCGACCTCG AGACCATCTC GATCGGCATC CACTCCGGGT GGGACGAGGG CATCGCCGTC
TCGCACCTGT TCAAGGTCAT GCTCGAGGAG GAGGGCTACA CGGTCGAGAC GACCGAGGCC
GACGCGGGCG TCGTCTACAC CGGTCTCACC GGTGGCGACT TCGACGTGAA CTTCGACATG
TGGCTGCCCA ACACCCACGC CGACTACCTC ACGCAGTACG GCGACGAGAT GGAGATGCTC
GGCGTCTGGT ACGACGACGC GAAGCTCACC ATCGCCGTCA ACGAGGACTC CCCCATCACC
TCGCTCGACG AGCTCGCGGA CAACGCCGAC GTGTTCGGCA ACCGCCTCGT CGGCATCGAG
TCCGGCGCCG GCCTGACCCG CATCACGCAG GACGACGCGA TCCCGGGCTA CGGCCTCGAG
GACATGAACT TCGTCGTGTC GTCCACCCCC GCGATGCTCG CCGAGCTCAA GGGCGCGACC
GACGCCGGCA ACGACGTCGC CGTGACCCTG TGGCGCCCGC ACTGGGCCTA CGACGCCTTC
CCGATCCGCG ACCTCGAGGA CCCGCAGGGC CTCATGGGCG AGGCCGAGGA GATCAACTCG
GTCGGCCGTG CCGACTTCGC CACCGACTAC CCGACCGCCG CGTCGTGGAT CGGTGCCTTC
GAGCTCACCG ACGAGCAGCT GTTCTCGCTC GAGAACATCA TGTTCAACGA GAACGGCGGC
TCGGACAACG ACGAGTCCGT CAAGCAGTGG CTCGAGGAGA ACCCGACCTT CGTCGACGAC
CTCAAGGCGT CCGCCGAGGC CTGA
 
Protein sequence
MLNRSTHRTA LVAGSLAVAL GLAACSSDDS SAEDAPRLDN GDLETISIGI HSGWDEGIAV 
SHLFKVMLEE EGYTVETTEA DAGVVYTGLT GGDFDVNFDM WLPNTHADYL TQYGDEMEML
GVWYDDAKLT IAVNEDSPIT SLDELADNAD VFGNRLVGIE SGAGLTRITQ DDAIPGYGLE
DMNFVVSSTP AMLAELKGAT DAGNDVAVTL WRPHWAYDAF PIRDLEDPQG LMGEAEEINS
VGRADFATDY PTAASWIGAF ELTDEQLFSL ENIMFNENGG SDNDESVKQW LEENPTFVDD
LKASAEA