Gene Sked_09160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_09160 
Symbol 
ID8632552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1044822 
End bp1045757 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content71% 
IMG OID 
Productcation diffusion facilitator family transporter 
Protein accessionYP_003313700 
Protein GI269794245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.236518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCCC ACGGTGGCAA CAAGGCGATC GTCGCGGCGC TGGCCGCGAA CCTCGGGATC 
GCGGCGACCA AGTTCGTCGC CTACCTGCTC ACGCACTCGT CGTCGATGCT CGCCGAGTCC
GTGCACTCCC TCGCCGACTC CGGCAACCAG GCGTTGCTCC TCGTCGGCGG CAAGCGTGCC
CGCCGGCAGG CCGACGAGCA GCACCCCTTC GGCTACGGCC GCGAGCGCTA CGTCTACGCC
TTCATCGTGT CCATCGTGCT GTTCAGCCTC GGTGGCCTCT TCGCGCTGTA CGAGGCGTAC
CACAAGTTCT CCGACCCCCA CGGGATCGAG TCGTGGCACT GGGTGCCCAT CGTGGTGCTC
GTCGCGGCCA TCGGCATGGA GGGCTTCTCG TTCCGCACGG CGGTCCGTGA GTCCAACCTG
GTCCGCGGCA AGCAGTCGTG GCCCCAGTTC ATCAAGACGG CCAAGGCCCC CGAGCTGCCG
GTGGTGCTCC TCGAGGACTT CGGGGCGCTC ATCGGCCTGG TGCTCGCGCT CTTCGGTGTG
GGGATGACGC TCATCACCGG TGACGGGCGC TACGACGCCG CGGGCACGGC GTGCATCGGC
GTGCTGCTGG TGCTCATCGC GGTCGTGCTC GCCCTCGAGA CCAAGTCGCT CCTCCTGGGG
GAGTCGGCCA GCAAGGACAC GGTCGCCGCG ATCGAGGCCG CCCTCGTCGG CCCCGGGGTG
CCGTCGGTGA TCCACCTCAA GACGCTGCAC CTGGGCCCCG AGGAGGTGCT CGTCGCGGCC
AAGATCGAGG TCGACGCGAC CGAGAGCGCC CGCGAGGTCG CGGACGCGAT CGACGAGGCC
GAGGCACGCG TGCGGGCCGC GGCTCCCGGG CTGTCGATGC GCATCTACCT CGAGCCCGAC
CTCCGCGACG CGGCGGGGGC GCTCCGGAAG CCCTGA
 
Protein sequence
MSAHGGNKAI VAALAANLGI AATKFVAYLL THSSSMLAES VHSLADSGNQ ALLLVGGKRA 
RRQADEQHPF GYGRERYVYA FIVSIVLFSL GGLFALYEAY HKFSDPHGIE SWHWVPIVVL
VAAIGMEGFS FRTAVRESNL VRGKQSWPQF IKTAKAPELP VVLLEDFGAL IGLVLALFGV
GMTLITGDGR YDAAGTACIG VLLVLIAVVL ALETKSLLLG ESASKDTVAA IEAALVGPGV
PSVIHLKTLH LGPEEVLVAA KIEVDATESA REVADAIDEA EARVRAAAPG LSMRIYLEPD
LRDAAGALRK P