Gene Sked_09120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_09120 
Symbol 
ID8632548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1041860 
End bp1043449 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content72% 
IMG OID 
Productphosphomannomutase 
Protein accessionYP_003313696 
Protein GI269794241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.187509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCCC GTGACACCTC AGGCACCTCG AGCGCCGTCG ACCTCTCTGA CCTCATCAAG 
TCGTACGACG TGCGCGGGGT CGTCCCCGAG CCCTTCAGCC CTGCTGTCGC CGAGGCGATC
GGCGCGGCCT ACGCCACGGT CGTGGTCATC CCGGACGCGG GCGACGCTGC TGACGCCACC
CCGAGCGACC CTGCTGCGAC GGCCGGGACC GGCACCCGCG CCCGGCCCAC GGTCGTCGTG
GGCCACGACA TGCGCGACTC CGGCCCCGAG CTCGTCGAGG CCTTCACCCG TGGTCTGGTG
AGCGCCGGCG TGGACGTCGT GCACATCGGC CTGTGCTCGA CCGACGGGCT CTACCACGCG
TCGGGCGTGC TGCACGCGCC GGGGGCGATG TTCACCGCGA GCCACAACCC GGCGCGCTAC
AACGGCATCA AGCTGTGCCG GGCGGGTGCG CGCCCCGTCG GGCAGGACAC CGGTCTGAGC
CAGGTGCGCG AGCTCGCCGA GCAGTACCTC ACCCACGGTC TGCCGGGCCC GGCGACCGAG
CTCGGCCAGA CGAGCGAGCG GTCGATGCTC GGCGACTACG CCGCGTTCCT GCGCGGCCTC
GTCGACATCT CCGGCATCCG CCCGCTCAAG GTGGTCGTCG ACGCGGGCAA CGGCATGGGC
GGCTACACGG TCCCCGCCGT GCTCGAGTCC GGCGCCGGGC TGCCGGCCCT GCCGCTCGAG
GTAGTGCCGC TGTACTTCGA GCTCGACGGG ACCTTCCCCA ACCACGAGGC CAACCCCCTC
GACCCCAAGA ACCTCGTCGA CCTGCAGGCC GCGGTCGTCG AGCACGGTGC AGACCTCGGG
CTCGCCTTCG ACGGCGACGC CGACCGCTGC TTCGTGGTCG ACGAGCTGGG GCAGGCCGTG
AGCCCGTCGG CGATCACCGC GCTCGTCGGG CTGCGCGAGG TCGCCCGCGA GATCGCCGCG
GGCCGGACGC CGACGGTGAT CCACAACCTC ATCACCTCGC GCGCCGTGCC GGACTTCCTC
ACGGCCGCGG GCGCGGAGGT CGTGCGGACC CGCGTCGGGC ACTCCTTCAT CAAGGCGCAG
ATGGCCGAGC ACGACGCCGT GTTCGGCGGG GAGCACAGCG CGCACTACTA CTTCCGCGAC
TTCTTCTTCG CCGACACCGG CATGCTCGCG GCGCTGCACG TGCTCGCGGC CCTGGGCGAG
CAGCCGCACC CGCTGTCCGA CCTCGCGCTC GCCTACGAGC CGTACTCGGC GAGCGGCGAG
ATCAACTCGA CGGTCGACGA CGTCCCGGCA GCGCGCGAGC GCGTCGTCGA GGCGTACGTG
ACCGAGCAGG GGGCCGGTCC CGTCACGGTC GACGAGCTCG ACGGGCTCAC CGTCTCGCAC
TGGGACGAGC GCCCGCGCTG GTGGTTCAAC CTGCGCGCCT CGAACACCGA GCCGCTGCTG
CGCCTCAACG TCGAGGCCGA GGACGAGGAC ATCATGGAGA AGGTCCGCGA CGACGTGCTC
TCGCTCGTCC GGTCGACGGG CGCGGAGACC AGTGCCGGAC AGCACGAGAT CAGCAGCCAG
CACGACGACA CGGACGAGGT GACGGCATGA
 
Protein sequence
MDSRDTSGTS SAVDLSDLIK SYDVRGVVPE PFSPAVAEAI GAAYATVVVI PDAGDAADAT 
PSDPAATAGT GTRARPTVVV GHDMRDSGPE LVEAFTRGLV SAGVDVVHIG LCSTDGLYHA
SGVLHAPGAM FTASHNPARY NGIKLCRAGA RPVGQDTGLS QVRELAEQYL THGLPGPATE
LGQTSERSML GDYAAFLRGL VDISGIRPLK VVVDAGNGMG GYTVPAVLES GAGLPALPLE
VVPLYFELDG TFPNHEANPL DPKNLVDLQA AVVEHGADLG LAFDGDADRC FVVDELGQAV
SPSAITALVG LREVAREIAA GRTPTVIHNL ITSRAVPDFL TAAGAEVVRT RVGHSFIKAQ
MAEHDAVFGG EHSAHYYFRD FFFADTGMLA ALHVLAALGE QPHPLSDLAL AYEPYSASGE
INSTVDDVPA ARERVVEAYV TEQGAGPVTV DELDGLTVSH WDERPRWWFN LRASNTEPLL
RLNVEAEDED IMEKVRDDVL SLVRSTGAET SAGQHEISSQ HDDTDEVTA