Gene Sked_08920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_08920 
Symbol 
ID8632528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1019412 
End bp1020407 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content69% 
IMG OID 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_003313677 
Protein GI269794222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0563626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.417608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGC TCGTCACCGG TGGGGCCGGG TTCATCGGCT CGAACTTCGT CCACACGACC 
GTCCGCGACC GCCCCGACGT CGAGGTGACG GTGCTCGACG CCCTCACCTA CGCCGGTGAC
GCCACCTCGC TCGCGCCGGT CGCCGACCGC GTCACCCTGG TGCAGGGCGA CATCACCGAC
GGTGCGCTGG TCGACCGGCT CGTCGGCGAG AGCGACCTCG TGGTGCACTT CGCCGCGGAG
TCGCACAACG ACAACTCGCT CCACGACCCG TGGCCCTTCG TGCAGACCAA CCTCATCGGC
ACGTACACGC TGCTCGAGGC CGTCCGCAAG CACGGCGTGC GGTACCACCA CATCTCGACC
GACGAGGTCT ACGGCGACCT CGAGCTCGAC GACCCTGCCA AGTTCACGGC CGACACCCCG
TACAACCCGT CGAGCCCGTA CTCGTCCACG AAGGCCGGCA GCGACCTGCT GGTGCGCGCC
TGGGCGCGGT CCTTCGGCGT GCAGGCGACC ATCTCGAACT GCTCGAACAA CTACGGGCCG
TACCAGCACA TCGAGAAGTT CATCCCGCGC CAGGTCACCA ACCTCATCGA CGGCGTGCGC
CCCCGCCTCT ACGGGGCGGG TGAGAACGTG CGCGACTGGA TCCACGTGGA GGACCACAAC
ACGGCGGTGT GGGCGATCAT CGACCGCGGC CAGATCGGCG AGACCTACCT CATCGGGGCC
GACGGCGAGA AGAACAACCT CGAGGTGGTC CAGACCCTCC TCGAGGTGTT CGGTCGCCCG
ACCGACGACT TCGACCACGT GACCGACCGC GCGGGGCACG ACATGCGCTA CGCGATCGAC
GCGACCCGCC TGCGCACCGA GCTCGGCTGG GAGCCGACCT TCACGGACTT CGGCGCCGGC
CTGCGCGCCA CCGTCGAGTG GTACCGCGCC AACGAGGCGT GGTGGCGCCC GGCCAAGGCC
GCGACCGAGG CCAAGTACGC CCAGGCCGGC CACTGA
 
Protein sequence
MRLLVTGGAG FIGSNFVHTT VRDRPDVEVT VLDALTYAGD ATSLAPVADR VTLVQGDITD 
GALVDRLVGE SDLVVHFAAE SHNDNSLHDP WPFVQTNLIG TYTLLEAVRK HGVRYHHIST
DEVYGDLELD DPAKFTADTP YNPSSPYSST KAGSDLLVRA WARSFGVQAT ISNCSNNYGP
YQHIEKFIPR QVTNLIDGVR PRLYGAGENV RDWIHVEDHN TAVWAIIDRG QIGETYLIGA
DGEKNNLEVV QTLLEVFGRP TDDFDHVTDR AGHDMRYAID ATRLRTELGW EPTFTDFGAG
LRATVEWYRA NEAWWRPAKA ATEAKYAQAG H