Gene Sked_08890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_08890 
Symbol 
ID8632525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1015257 
End bp1016000 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content66% 
IMG OID 
ProductABC-type polysaccharide/polyol phosphate transport system, ATPase component 
Protein accessionYP_003313674 
Protein GI269794219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.382609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCT CACGCACCAC CACCGGCCCG GTCAACATCG AGATCGCCGA CGTCACCAAG 
TCCTTCACGC TCCGCCACCA GCGGTCCATG AAGGAGCTGC TCGTCGCCTC CGTCAAGGGC
AAGGACCTGT CCAACAGCTT CAACGCCCTC GACGGCGTGA GCTTCGACGT CCACGAGGGC
GAGACCGTCG CGCTCCTCGG CTTCAACGGC TCGGGCAAGT CCACCTTGCT CAAGCTCATC
GCCGGCGTCA TGCACACCGA CGGCGGGACC ATCCGCACCC GCGGACGCGT CGCCGGGCTC
ATCGAGGTCG GGGCCGGGTT CCACCCGGAC CTCACCGGCC GCGAGAACGT CTACATGAAC
GGCGCCATCC TCGGGATGAG CGAGCAGGCG ATCGAGAAGA GGTTCGACGA CATCGTCGCC
TTCTCCGAGA TCGAGAAGTT CATCGACACC GAGGTGAAGT TCTACTCCTC GGGCATGTTC
CTGCGCCTCG CCTTCTCGGT CGCCGTGCAC TCGGACCCCG AGGTGTTCCT CATCGACGAG
ATCCTCGCCG TCGGTGACGA GCCGTTCCAG AAGAAGTGCC TCGCGCGCAT CCGTGAGCTC
TCCGCCGAGG GCCGCACCCT CGTCATCGTC TCCCACGACC TCGACATGGT CGCCGACCTG
TGCGACCGCG GCATCCTGCT CGAGAAGGGC AAGATCGTCG CCGACGGCGA GAGCCACGAG
GTCGTCAAGC AGATGCGAGG CTGA
 
Protein sequence
MATSRTTTGP VNIEIADVTK SFTLRHQRSM KELLVASVKG KDLSNSFNAL DGVSFDVHEG 
ETVALLGFNG SGKSTLLKLI AGVMHTDGGT IRTRGRVAGL IEVGAGFHPD LTGRENVYMN
GAILGMSEQA IEKRFDDIVA FSEIEKFIDT EVKFYSSGMF LRLAFSVAVH SDPEVFLIDE
ILAVGDEPFQ KKCLARIREL SAEGRTLVIV SHDLDMVADL CDRGILLEKG KIVADGESHE
VVKQMRG