| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_08840 |
|---|
| Symbol | |
|---|
| ID | 8632520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1009342 |
|---|
| End bp | 1010232 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| Protein accession | YP_003313669 |
|---|
| Protein GI | 269794214 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.704211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAGCA ACCCCTCCGA GGGGAGCAAG CGCATCCCCA GATCTGAGCG GGTCGAGCAG
GTCGCAGCAG GTCTGACCCC GGTGAACGCC CAGATGTCGA TCGGTCGTTA CACGCGTCAG
GTATGGGGCC GCCGCCGCTT CGTCGCGGCG CTCGCGTCGT CGAAGCTGAG CGCCAAGCAC
GGCAAGGACC GTCTCGGGAG CCTGTGGCTC ATCTTGACGC CGCTGCTCAA CGCAGCCACG
TACTACCTGA TCTTCGGTGT GCTCCTCGAC ACGCAGCGGG GCATCGAGAA CTTCGTCGGG
TTCTTGATCA TCGGCGTGTT CGTGTACCAG TTCTCCGCGA GCACCATCAA CGAGGGCTCG
CGCTCGATCG TGTCGAACAC GAAGCTGCTG CAGACGCTCC ACTTCCCGCG TGCGGTGCTG
CCGCTCTCCG TGGTCGTCCG CCAGGTCATC GCCTTCATGC CTGCGCTCGC AGTCATGTTC
GTGATCGTGC TCGCGATCCC CCCGCACGCC TCCGTCACGT GGCGCTGGCT GCTCGTCGTA
CCGGTCTTGA TCCTCCAGGT CGCCTTCAGC ACGGGGGTGG CGCTGATGCT CGCCCGGCTC
GTCGCACGGG TGAACGACAT CAGTAACCTC ATGCAGTTCG TCATGCGCGC GTGGATGTAC
TTCTCCGGGA TCTTCTACTC CTTCGACCGG TTCGACGCCT ACCCGACCGC GAAGGCGGTC
CTCGAGCTGA ACCCGCTCCA CGCCTTCCTC ACGATCTACC GAGACGCGGT GCTCTACGAG
CAGGTCGCGC CCGCAAAGGA CTGGTACGTC GCGGTGGCGT GGTCCCTCGC TGCCCTGGTG
GTCGGTTGGG TCGTGTTCTG GCGTGGCGAG AAGGAGTACG GACGTGTCTG A
|
|---|
| Protein sequence | MPSNPSEGSK RIPRSERVEQ VAAGLTPVNA QMSIGRYTRQ VWGRRRFVAA LASSKLSAKH
GKDRLGSLWL ILTPLLNAAT YYLIFGVLLD TQRGIENFVG FLIIGVFVYQ FSASTINEGS
RSIVSNTKLL QTLHFPRAVL PLSVVVRQVI AFMPALAVMF VIVLAIPPHA SVTWRWLLVV
PVLILQVAFS TGVALMLARL VARVNDISNL MQFVMRAWMY FSGIFYSFDR FDAYPTAKAV
LELNPLHAFL TIYRDAVLYE QVAPAKDWYV AVAWSLAALV VGWVVFWRGE KEYGRV
|
|---|
| |