Gene Sked_08830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_08830 
Symbol 
ID8632519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1007022 
End bp1009157 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content67% 
IMG OID 
Productpredicted acyltransferase 
Protein accessionYP_003313668 
Protein GI269794213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.63777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCG TCACGTCACA CGTCGGGCCA GCCGACCCCG CTCCAACCAG GTCCTCGACC 
AGTCGTGGAC CCCGGCTCGG CTATCGCCCG GACATCGAGG GGCTCAGGGC TGTCGCCATC
GGGCTCGTCC TGATCTACCA CGCTGGCCTG CCGTGGATCC CCGGCGGCTT CATCGGCGTC
GACGTGTTCT TCGTCATCTC CGGGTTCCTC ATCACAGGGG TGATCCTCCG TGAGGTCGCC
GAGACCGGTC GCCTGTCGCT GGTGGGCTTC TACGCGCGGA GAGCCAAGAG GCTGCTCCCA
GCCACGGTCG CGGTGCTCGT CACGACCGCC GTGCTCACCG TCGTCTTCCT CCCGGTCAGC
CAGCGCGCCG TCTTCGGCGG AGACATCGCC GCCGCAGCCG GCTACATCGT CAACTGGCGG
CTGGCCGACC GAGCCGTCGA CTACCTCGCC GAGGATGCTG GCTCGTCGCC TGTCCAGCAC
TTCTGGTCGC TGGCCGTCGA AGAGCAGTTC TACGTGGTGT GGCCGGTGCT CATCGTCGTG
ATCCTCGCCG TGGGCCGGCT CGCCCGTCGC GGCAGCCAGG GCAAGAGCCA GACCCTCACC
CTGGGGCTCG GCCTCGCTGC GATCGCCGTC CCGTCGTTCC TCTGGGCACT CCACCTGACT
CCGGTCTCGC CCAACGTCGC CTTCTTCGTC ACGACCACGA GGCTGTGGGA GCTCGGGGTC
GGTGCAGCAG TCGCGTTGTC CATGGCTCTC CTCTCCAAGA TCAACAAGCA GGCGTCTTCC
GTCCTCGCCA CCGTGGGCCT GCTCGCCATC ATCGTCCCGG CCTTCGCCTA CGGGTCGTCG
ACGACCTGGC CAGGACCTGC CACGCTCGTG CCGGTCCTCG GTACTGCCGC GGTCATCGCC
GCTGGAGTCG CCGGGCACGA GAATCCTGTC CGCGCTCTCC TGTCGTGGAA ACCGGCAGTC
TGGATCGGAG GGCTCTCCTA CTCGCTCTAC CTCTGGCACT GGCCGCTGCT CGTGTTCGCG
ACCGCCCACT ACGGTGAGCT CGGCGTGAAG CGAGGACTGC TCGTGGTCGC ACTCTCGTTC
ATCCCGGCTT ATCTCAGTCT CCGGTTCATC GAGAACCCGG TTCGCCGCTC GAAGATCCTC
GCCAGGCGCC CTGGGCTGAC TCTTTCCGTC GGTCTCAACT GCACCCTTGT CGGGATCCTG
GCGGGGGCCC TGCTCATGGT CGCCCCGAAC AGGGCCTCGA CCGCATCAGA AGGGCCGGTC
GTCGAAGGGC CCGGGGCAGC AGCCATCTTC GTCCCGGGCG CGGACCTCGA CGCGATCGCC
TCGGCGACCT CTGCGGGCGT CATATCGCCC GACCCCATGT TCGCCGTCGA GGACGCTCCC
CAGCTGTACA TCGACGGGTG CCAGATGGCC TTCGACATCA CGACTGCAAC GGTGTGCGAC
TACGGCGACC TGACCAGCGA CCGGACCATG ATCATGGTCG GCGACTCCAA GATCGCTCAG
TGGCAGCCAC CGCTCGAGGA CTACGCGGTG AAGAACGGGT ACAAGCTCCA GACCCTGATC
AAGTCCTCGT GCACACCCAG CCCTGCGGTC CTCTTCAAGG AGGAGGCGCC GTACACCACC
TGCGCAGACT GGAGCGCTGC CGCCTCCGAG ATCCTCCTTG AAGAGCTCCC GGACGTGGTC
ATCTACGGCA ACGGAGCGAC CAGGGCGATG AACGACCCGC AGAACCCTGA GGCGGGTGTG
TCACCCGAGG CCCTCGCCGA CGGGATCGCG CAGCAGTGGC GGCTCCTGGA GGACGCAGGC
ATCGAGGTGG TCGTCCTGCT GGACAACCCC TCTCCGGGAA AGCTCTCACC CGTCTACGAC
TGCGTCCTCG AGAACCCTGA CGCGCTGGAC AGGTGCTCGT TCCCCCAGGA AGAGGGAGAG
AGCCGCTCCG CAGCGTCCGT CCAGCTGGCC GCGGCCAGCC AGGTCCCTGA GGTCGACGTG
CTGGACCTCA CCGATGCTCT CTGCCCTGCC GGGACCTGCC CGGCCGTCAT CGGAGACACC
CTCGTCTACC GGCAGGGCTC GCACCTGACC ACGAACTACG TGCGGTCCGT GGGGCCGCAG
GTCGAGGAGC GACTGCACGC CATGCTCGGA GACTGA
 
Protein sequence
MNTVTSHVGP ADPAPTRSST SRGPRLGYRP DIEGLRAVAI GLVLIYHAGL PWIPGGFIGV 
DVFFVISGFL ITGVILREVA ETGRLSLVGF YARRAKRLLP ATVAVLVTTA VLTVVFLPVS
QRAVFGGDIA AAAGYIVNWR LADRAVDYLA EDAGSSPVQH FWSLAVEEQF YVVWPVLIVV
ILAVGRLARR GSQGKSQTLT LGLGLAAIAV PSFLWALHLT PVSPNVAFFV TTTRLWELGV
GAAVALSMAL LSKINKQASS VLATVGLLAI IVPAFAYGSS TTWPGPATLV PVLGTAAVIA
AGVAGHENPV RALLSWKPAV WIGGLSYSLY LWHWPLLVFA TAHYGELGVK RGLLVVALSF
IPAYLSLRFI ENPVRRSKIL ARRPGLTLSV GLNCTLVGIL AGALLMVAPN RASTASEGPV
VEGPGAAAIF VPGADLDAIA SATSAGVISP DPMFAVEDAP QLYIDGCQMA FDITTATVCD
YGDLTSDRTM IMVGDSKIAQ WQPPLEDYAV KNGYKLQTLI KSSCTPSPAV LFKEEAPYTT
CADWSAAASE ILLEELPDVV IYGNGATRAM NDPQNPEAGV SPEALADGIA QQWRLLEDAG
IEVVVLLDNP SPGKLSPVYD CVLENPDALD RCSFPQEEGE SRSAASVQLA AASQVPEVDV
LDLTDALCPA GTCPAVIGDT LVYRQGSHLT TNYVRSVGPQ VEERLHAMLG D