Gene Sked_08800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_08800 
Symbol 
ID8632516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1000045 
End bp1001271 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content70% 
IMG OID 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_003313665 
Protein GI269794210 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.130627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.313185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCCGA CCATCGCCGT CATCGGCCTG GGATACATCG GACTTCCGAC CGCGGCTGCG 
CTGGCCGCTC CGGGGACGCG GGTGCACGGC ATCGACGTGA GCCAGCGGAC GGTCGACATG
GTCAACAGGG GCGAGCTGCC CTTCGTCGAG CCCGGCCTCG AGCAGGCGCT CCAGTCGGCC
GTGCGTCGTG GTGACCTCAC CGCGTCGACG ACCACGCCGC ACGCTGACGT GTACATCGTC
GCCGTGCCGA CGCCCTTCCA GGACGACCAC CAGGCCGACC TCTCATACAT CGAGGCGGCG
ACCCGCACCC TGTCGGCGCA GCTCACCGGT GGCGAGCTCG TGATCCTCGA GTCCACCTCC
CCTCCCGGCA CCACGGAGAA GATGGGCGAG TGGATCGACG AGGAGCGCCC CGACCTCGCG
GGCAACGTGC TCCTGGCGCA CTGCCCCGAG CGTGTGCTCC CGGGCCGCGT GATGATCGAG
CTGGTCAAGA ACGACCGCGT CATCGGTGGT GTGACCCCCG AGGCCGCCGT CGCCGCGCAG
CAGGTCTACC GCATCTTCTG CGAGGGTGAG CTGCTGCTCA CCGACGCCCG CACGGCCGAG
ATGGCCAAGC TGGTCGAGAA CTCCTACCGC GACGTCAACA TCGCCTTCGC GAACGAGCTG
TCGCAGGTCG CCGCGAAGCT CGACATCGAC GTGTGGGAGC TCATCAACCT GGCCAACCAC
CACCCGCGCG TCAACATCCT GCAGCCCGGC CCCGGTGTCG GCGGCCACTG CATCGCGGTC
GACCCGTGGT TCATCGTCTC GGCCGCCCCG CAGGAGTCGC GCCTCATCCG CACGGCCCGC
GAGGTCAACG ACGCGAAGCC GCACCAGGTG ATCGACCAGA TCCTCGCCCA CGCGAAGGAC
GTCGAGAACC CGACCATCGC GCTGCTCGGC CTGGCCTTCA AGGCGAACAT CGACGACCTC
CGCGAGAGCC CGGCGCGCTA CATCGCCAAG GAGCTCGCCG ACCGTCTGCC CGAGGCGACG
ATCCTCGCCG TCGAGCCGCA CGTCGAGGAG CTCCCCGCCG AGCTCGCCGC GCTGTCGAAC
GTGCGCCTGT CGCCGCTCAA CGAGGCCCTC GAGGCCTCGC AGGTCGTCGC GCTGCTCGTG
GACCACGACC TCTTCGGTCT CGTGGACCAC GCGGTCCTCG CCGACAAGGC GGTCGTGGAC
ACCCGCGGCC TGTGGCGCAA CGTCTGA
 
Protein sequence
MNPTIAVIGL GYIGLPTAAA LAAPGTRVHG IDVSQRTVDM VNRGELPFVE PGLEQALQSA 
VRRGDLTAST TTPHADVYIV AVPTPFQDDH QADLSYIEAA TRTLSAQLTG GELVILESTS
PPGTTEKMGE WIDEERPDLA GNVLLAHCPE RVLPGRVMIE LVKNDRVIGG VTPEAAVAAQ
QVYRIFCEGE LLLTDARTAE MAKLVENSYR DVNIAFANEL SQVAAKLDID VWELINLANH
HPRVNILQPG PGVGGHCIAV DPWFIVSAAP QESRLIRTAR EVNDAKPHQV IDQILAHAKD
VENPTIALLG LAFKANIDDL RESPARYIAK ELADRLPEAT ILAVEPHVEE LPAELAALSN
VRLSPLNEAL EASQVVALLV DHDLFGLVDH AVLADKAVVD TRGLWRNV