Gene Sked_08600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_08600 
Symbol 
ID8632496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp975815 
End bp976492 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content69% 
IMG OID 
Productglycosyl transferase 
Protein accessionYP_003313645 
Protein GI269794190 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.36917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATT CTCACGCGGA CGACTGGCTC GTCATCCCGC TGTACAACGA GGCCACCGTC 
ATCGCCGACG TCGTGAAGGG TGCCCTCGAG GTCTTCCCCA ACATCGTGTG CGTGGACGAC
GGCAGCACCG ACGGCTCGGG CGAGGCCGCC CGGCGGGCCG GGGCGACCGT CCTCACGCAC
GCCGTGAACC TCGGTCAGGG GGCCGCCCTC CAGACGGGCA TCTCCTTCGT GTGCGAGCAG
CCGGTCGCCC GGGCGCTGGT GACCTTCGAC GCCGACGGCC AGCACCAGGT GGCCGACGCG
GACGCCATGG TCGCGCTCAT CGCGTCGGGC GAGACGGCGA TCGTGTTCGG GTCACGCTTC
CTCGACGGCC GGACCAAGCC GGGGTTCATG AAGCGGACCA TCCTCACCTT CGCGGTGTGG
TTCACCAAGC AGAGCACCGG CATGCGGCTC ACCGACGCGC ACAATGGGCT GCGCGCCATG
AGCGTCGACG CCGCGCGCGG CGTGCACCTG CAGCAGGACC GGATGGCGCA CGCGAGCGAG
ATCGTCCTGC AGCTCGGCCG CACCGGGCTG CCGTGGCGCG AGTACCCCGT GCACGTCCTC
TACACCGACT ACTCCCGCGG CAAGGGGCAG TCCATGTGGA ACTCCGTGAA CATCCTCGTG
GACCTGTTCT TCAAGTAG
 
Protein sequence
MQDSHADDWL VIPLYNEATV IADVVKGALE VFPNIVCVDD GSTDGSGEAA RRAGATVLTH 
AVNLGQGAAL QTGISFVCEQ PVARALVTFD ADGQHQVADA DAMVALIASG ETAIVFGSRF
LDGRTKPGFM KRTILTFAVW FTKQSTGMRL TDAHNGLRAM SVDAARGVHL QQDRMAHASE
IVLQLGRTGL PWREYPVHVL YTDYSRGKGQ SMWNSVNILV DLFFK