Gene Sked_08550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_08550 
Symbol 
ID8632491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp970575 
End bp971108 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content75% 
IMG OID 
Productphosphoribosylaminoimidazole carboxylase, PurE protein 
Protein accessionYP_003313640 
Protein GI269794185 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.932147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.717042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC CCGTCGTCGG CATCGTCATG GGCTCGGACT CCGACTGGCC GGTCATGCAG 
GCCGCAGCCG ACGCGCTCGC CGAGCTCGGC GTCGAGGTCG AGGTCGACGT GGTCTCCGCG
CACCGGATGC CCACCGAGAT GATCGACTAC GGCCGCGACG CGGCCGGGCG CGGGATCCGC
GTCATCATCG CGGGCGCCGG GGGAGCGGCC CACCTGCCGG GCATGCTCGC CGCCGTGACG
CCCCTCCCGG TGGTCGGCGT GCCGGTGCCG CTGGCCTACC TCGACGGCAT GGACTCGCTG
CTGTCCATCG TGCAGATGCC CGCGGGAGTG CCCGTCGCCA CCGTGTCGAT CGGCGGCGCA
CGCAACGCCG GGCTCCTGGC GGCGCGCATC CTCGCGAGCG GCACGGACGA CGAGTCCCTC
GCCCTGCGCG AGCGGATGGT CGCCTTCCAG GCCGCGCTGA GCGACCAGGC CAAGGAGAAG
GGCGCCCGCC TGCGCGCCAG CCGTACGCGC CCCGCCGCCG GCTTCAGCGC CTGA
 
Protein sequence
MSTPVVGIVM GSDSDWPVMQ AAADALAELG VEVEVDVVSA HRMPTEMIDY GRDAAGRGIR 
VIIAGAGGAA HLPGMLAAVT PLPVVGVPVP LAYLDGMDSL LSIVQMPAGV PVATVSIGGA
RNAGLLAARI LASGTDDESL ALRERMVAFQ AALSDQAKEK GARLRASRTR PAAGFSA