| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_08520 |
|---|
| Symbol | |
|---|
| ID | 8632488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 967314 |
|---|
| End bp | 968621 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_003313637 |
|---|
| Protein GI | 269794182 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0435265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.631438 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACGG TGTCCGCCGT GGCCGTCGCC GTCATCCTGC TGGGGCTGCC CCTCGCCCTC
ATCGGGGCGA CGCTCGTGCG CGACAACGAG ATCCGCTCGC TCCAGTCACG CACCTCCGAG
CTCGGCCGCT CCATCGAGAA CCGCCTGGCC CGCGACGAGC AGATCACCCC CGACCTCCTC
GAGAGGTACG TGGGAGGCGA CGACGGGAAC CTCCAGGGCT ACGTCCAGGT GTTCGGCGTC
GGCGACAAGA TCACCGCCGG CGACCCCATC GAGGGGCGCA CCGAGTCGCG GCCCATCCGC
ACGCAGTCCA ACTGGATCGT GCAGATCGAG GTGTCGACGT GGTCGCTCTA CCTGCGCAGC
GCGCAGGTGG TCGTGCTCGT GGTCGCCGCG GCGGTGGTCG CCTTCGGGGC GGGCATCGTC
ATGGCCGTGT GGCAGGCCAA CCGGCTCTCC GCGCCCCTCG TGTACCTCGC CGCCTCCGCC
GAGCAGCTCG GGTCGGGGCA GGTCAGACCC CGGATCGAGC CCTCCGGCGT CGAGGAGATC
GACCTCGTCG CCGCGGAGCT CGGGCGCAGC TCGGACCGCA TGGCCGGTCG GCTCGCGGCC
GAGCGGCAGT TCGCCTCGGA CGCCTCGCAC CAGCTGCGCA CGCCCCTCAC GGCGCTGTCC
ATGCGCCTCG AGGAGATCGC GATGGCGGCC CCGGACAACG CCGAGGTGCA GGAGGAGGCG
CGGATCTCGC TCGAGCAGGT CGAGCGCCTG GTCCGCGTGG TCGACGACCT CCTCTCCCGC
TCGCGCACCT CGGGAGGGAC CACCGAGGCC GTGCACCTCG TCGAGGTGCT GCAGCAGCAG
GAGGAGGAGT GGGGGCCGAC CTTCGAGCAG AACGGCCGCT CCCTCGTCAT CGACGTCTCC
GACGAGATCC ACGTCCTCGC GACCCCCGGT GCGCTCGCCC AGGTGCTCGC GACGCTCATC
GAGAACTCGC TCAAGCACGG CGGCGGGACC ACCACGGTCC GCGCCAAGCA GTCCGGCCCG
AGCAAGGCCA TGGTCATCAC GGTGACCGAC GAGGGCGCCG GGGTCCCGGA CGACCTCGCG
CCGCGGATCT TCGAGCGCGA GGTCACCTCG GGCAAGGGCA CCGGGCTCGG CCTGGCGCTG
GCCCGCGACC TCGCCGCGGC CGACGGTGGC CGCCTCGAGC TCACGCAGCG CCAGCCGCCC
ATCTTCTCGG TGTTCCTCGC GGGCGTGCCC CGCACCATGA ACCCCGACGT GGTCATCCCG
CGCGGCGTGG CGATCTCCAG CAGCTCGAAG CGCCGCCGGT CCTGGTAG
|
|---|
| Protein sequence | MATVSAVAVA VILLGLPLAL IGATLVRDNE IRSLQSRTSE LGRSIENRLA RDEQITPDLL
ERYVGGDDGN LQGYVQVFGV GDKITAGDPI EGRTESRPIR TQSNWIVQIE VSTWSLYLRS
AQVVVLVVAA AVVAFGAGIV MAVWQANRLS APLVYLAASA EQLGSGQVRP RIEPSGVEEI
DLVAAELGRS SDRMAGRLAA ERQFASDASH QLRTPLTALS MRLEEIAMAA PDNAEVQEEA
RISLEQVERL VRVVDDLLSR SRTSGGTTEA VHLVEVLQQQ EEEWGPTFEQ NGRSLVIDVS
DEIHVLATPG ALAQVLATLI ENSLKHGGGT TTVRAKQSGP SKAMVITVTD EGAGVPDDLA
PRIFEREVTS GKGTGLGLAL ARDLAAADGG RLELTQRQPP IFSVFLAGVP RTMNPDVVIP
RGVAISSSSK RRRSW
|
|---|
| |