| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_08440 |
|---|
| Symbol | |
|---|
| ID | 8632480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 957800 |
|---|
| End bp | 959278 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_003313629 |
|---|
| Protein GI | 269794174 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.367535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.378005 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACC TCGTGTCCAA GTACAGCGCG CTCGACCCCG CGGACGCCGA GTGGCTGCAC
CTGCTGGTCG GGGACTGGCA GCTCATCTCC GACCTGGCCT TCGCCGACCT GGTGCTCTGG
CTGCCGACGA CCGACGGCGG CTTCGTCGCC GTGTCGCAGT GCCGGCCCAG CACCGGGGCG
ACCGTCCACC ACGACGACAT CGTCGGGTCC TTCGCCCCCG AGGGGCTGCT GCCGCAGCTC
GAGCGGGCGC TCACCGAGGC GAGCACGCAG CGCTCGCGCG AGCCCCGCTG GTTCGGTACC
TACGCCGTCC GCGAGGAGGT CGTCCCCGTG GTGCACGCGG GCCGGTCGAT CGCCGTCGTC
GCCCGCCAGA CGAACCTGGG CAGCGGCCGG ACGCCGAGCC GCCTCGAGCT CAACTACGTC
GAGGCCGCCG ACGACCTCAT GAACATGGTG ACCACGGGCG AGTTCCCGTC CCCCGACGGG
GCGACCGGCC CGCGCCGGGG TGCGCCGCGC GTGGGCGACG GGCTCATCCG GCTGAACTCC
GAGGGCGAGG TGCTCTACGC GAGCCCCAAC GCCCTGAGCT GCTTCCACCG CCTCGGTGTC
ATCGGTGCGC TGGTCGGCGA GTCGCTCATC GAGGTGACCA CCGAGCTGGT CGAGCACCAG
GTGCCCGTCG ACGAGTCCAT GCCCCTGGTC CTCATGGGGC GTGCGCCGTG GCGGACGGAG
ATCGACTCGC ACGGCGTGTG CCTGTCGGTG CGCTCCGTGC CGCTCACCGA GAACGGGCAC
CGCATCGGTG CCGTGCTCAT GTGCCGCGAC GTCTCAGAGC TCCGGCGGCG CGAGCGCGAG
CTCATCACCA AGGACGCCAC GATCCGCGAG ATCCACCACC GCGTGAAGAA CAACCTGCAG
ACCGTGGCCG CGCTGCTGCG CCTGCAGGCA CGTCGCATGA AGCTCCCCGA GGCGAAGGAG
GCGCTCGAGG AGGCCATGCG TCGCGTCGCG ACGATCGCCC TGGTGCACGA CTCGCTGTCG
CAGACCCTCG ACGAGGAGGT CGAGTTCGAC GACATGGTCG GCCGGGCGCT ACGGCTCACC
GCGGACGTCG CGTCGGCCGA CGTGAGCGTG CGGACGGTGC AGACGGGCTC CTTCGGGATG
GTCCCGGCGC AGGACGCCAC GGCGCTCGCG CTGATCCTCA CCGAGCTGGT GACCAACGCC
GTCGAGCACG GCCTGTCGTC GACCGGTGGT GGCACGGTCG AGGTCAAGGC GCAGCGCGAC
GGCGCCGACC TCACGGTCAC GGTGGCCGAC GACGGCATCG GGATGGGCGA GGGGCGCGAC
AAGGGCTCCT CGGGGGGCCT CGGCACGCAG ATCATCAACA CCCTGGTGAC CAACGAGCTC
CAGGGCACGA TCGACTGGTC GCCGCGCGAG GGCGGCGGCA CCCTCGTGAC CGTGGCCGTG
GTGCTGCGCG GCGTCACGAA CCACGACCCC TCGGCCTGA
|
|---|
| Protein sequence | MSNLVSKYSA LDPADAEWLH LLVGDWQLIS DLAFADLVLW LPTTDGGFVA VSQCRPSTGA
TVHHDDIVGS FAPEGLLPQL ERALTEASTQ RSREPRWFGT YAVREEVVPV VHAGRSIAVV
ARQTNLGSGR TPSRLELNYV EAADDLMNMV TTGEFPSPDG ATGPRRGAPR VGDGLIRLNS
EGEVLYASPN ALSCFHRLGV IGALVGESLI EVTTELVEHQ VPVDESMPLV LMGRAPWRTE
IDSHGVCLSV RSVPLTENGH RIGAVLMCRD VSELRRRERE LITKDATIRE IHHRVKNNLQ
TVAALLRLQA RRMKLPEAKE ALEEAMRRVA TIALVHDSLS QTLDEEVEFD DMVGRALRLT
ADVASADVSV RTVQTGSFGM VPAQDATALA LILTELVTNA VEHGLSSTGG GTVEVKAQRD
GADLTVTVAD DGIGMGEGRD KGSSGGLGTQ IINTLVTNEL QGTIDWSPRE GGGTLVTVAV
VLRGVTNHDP SA
|
|---|
| |