| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_08420 |
|---|
| Symbol | |
|---|
| ID | 8632478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 955469 |
|---|
| End bp | 956785 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | carbohydrate-binding protein |
|---|
| Protein accession | YP_003313627 |
|---|
| Protein GI | 269794172 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.837516 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.172242 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAGCA ACCCCCGTTC GCGCCGCCTG ACCACGGTGG TCGCCGGCGC TTCGATCATG
GCGCTCGCGC TCTCCGCCTG CTCGAGCGAC AGCGACGCCG AAGGCACCTC GACCAACGCC
GACGGCAAGG TCGAGCTCAC GATCGCCACG TTCAACAACT TCGGCTACAC CGACGAGCTG
CTCGCCGAGT ACACGGCCGC CAACCCCAAC GTGGTCATCA AGCACACGAA GGCCGCCAAG
ACCGAGGACG CCCGCTCGAA CCTCACGACC AAGCTCGCCG CCGGCGGTGA CGGCCTCGCC
GACATCGAGG GCATCGAGGT CGACTGGATG CCCGAGCTCG ACATGATCTC GACCGCCTTC
GCCGACCTCT CCGACCCCGA GGTCGAGGGC CGGTACGTCG ACTGGAAGCT CGCCCAGGGC
ACCGCGTCCG ACGGCACGCT CATCGGCCTC GGCACGGACA TCGGCCCGGC GGCCATCTGC
TACCGCTCCG ACCTCTTCGA GGCTGCCGGT CTGCCGACCG ACCCCGCCGA GGTCGCCGAG
CTGCTCGGCG GCGAGGACGC CACCTGGGAC GAGTACTTCC AGGTGGGCCA GCAGTTCGTC
GGCGCCAGCG ACACCGCCTG GTACGACTCC AGCCTCGCCA TCATGCAGGG CATGATCGGC
CAGGTCGACG CGGCCTACGA GGACCCCACC ACGGGCGAGC CCACGGACCT CTCGGCCAAC
ACCGAGGTCA AGGGCATCTA CGACTCGATC AACGCGGTCG CCCCCGACCT CTCGGCGCAC
CTCGACCAGT GGTCCCCGGA CTGGGACGCC GCGTTCCAGA ACTCCGGCTT CGCCACGATG
CTCTGCCCCG CCTGGATGAC CGGCCCGATC GAGGAGCGCG CTGGCGGCGT CGACGGCTGG
AACGTCGCTG ACGTCTTCCC CGGCGGCGGC GGCAACTGGG GCGGGTCCTT CCTGACCGTC
CCGAAGGCCG GCAAGAACGT CGAGGAGGCC AAGAAGCTCG CCCTGTGGCT GACCGCCCCC
GAGCAGCAGA TCAAGGCCTT CGCCAACGCG GGCACCTTCC CGAGCCAGGT CGCGGCCTAC
GAGGACGAGA CCCTCACCTC GGCCACGAAC GACTTCTTCA ACGACGCCCC GGTCGGCCAG
ATCTTCATCA ACCGCTCCAA CGCGGTGAAC CCGGTCCCGC CGTTCAAGGG CCAGAACTAC
TTCGCGATCC ACCAGGCCGT CCAGGACGCG CTCAAGCGGG TCGACGTCGA GCAGACGCAG
CAGCCGGACG AGGCGTGGAC CCAGGCGGTC TCCGACTTCA ACAACCTCGG CTTCTGA
|
|---|
| Protein sequence | MFSNPRSRRL TTVVAGASIM ALALSACSSD SDAEGTSTNA DGKVELTIAT FNNFGYTDEL
LAEYTAANPN VVIKHTKAAK TEDARSNLTT KLAAGGDGLA DIEGIEVDWM PELDMISTAF
ADLSDPEVEG RYVDWKLAQG TASDGTLIGL GTDIGPAAIC YRSDLFEAAG LPTDPAEVAE
LLGGEDATWD EYFQVGQQFV GASDTAWYDS SLAIMQGMIG QVDAAYEDPT TGEPTDLSAN
TEVKGIYDSI NAVAPDLSAH LDQWSPDWDA AFQNSGFATM LCPAWMTGPI EERAGGVDGW
NVADVFPGGG GNWGGSFLTV PKAGKNVEEA KKLALWLTAP EQQIKAFANA GTFPSQVAAY
EDETLTSATN DFFNDAPVGQ IFINRSNAVN PVPPFKGQNY FAIHQAVQDA LKRVDVEQTQ
QPDEAWTQAV SDFNNLGF
|
|---|
| |