Gene Sked_08280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_08280 
Symbol 
ID8632464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp937470 
End bp938648 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content73% 
IMG OID 
Productpredicted ATPase 
Protein accessionYP_003313613 
Protein GI269794158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA CCGTCGCCGT CGAGGGGTAC CGCACGCTGC GTGAGCTGGT GGTCGAGCTC 
GGGCAGCTCA CCGTCGTGAC CGGCGCCAAC GGCAGCGGGA AGTCGAACTT CTTCCGCGCG
CTGCGCCTGC TCGCCGCCTG CGGGCAGGGG CGGGTGGTGG GTGCGCTCGC CGCCGAGGGC
GGCCTGCCGT CGACGCTCTG GGCCGGTCCC CAGCACGGGA CGCGTCCGGG TGGTGTCGCC
CAGGGGACCC GGCGCACGGC CCCCGTCGCG CTGCGGCTCG GTTTCAGCGG GCCCGACCTC
GGGTACGCGA TCGACCTCGG CCTGCCGCAG ACCGCGCTCG CGTCTCCGTT CGCCCTCGAC
CCCGAGATCA AGACCGAGTC GGTGTGGTCA GGTGGGGTGC TGCGCACCGC CACGCTCCAG
GCGGAGCGGC GCAACGGGCA CGTCCGGACG CGCGACGACG GAGGCGGGTG GACGAGCGAG
GGGCGGAACC TGCGCACGTC GGAGTCGATG ATCGACGAGT TCGTCGACGA CACCGGCGCC
CCGGAGATGC TGCGCGTGCG CCGTGGCCTG CGCGACTGGC GGTTCTACGA CCAGTTCCGC
ACCGACCCGC TGTCGCCGGC CCGCTCCGCA CAGGTGGGCA CGCAGACGCC CGTGCTCGCC
GACGACGGTG CCGACCTCGC CGCCGCGCTC GAGACGATCC GCTGGATGAC CGCCGACGGT
GCGCTCGAGC GCGCCGTCGA CGACGCCTTC CCGGGATCGA CCCTCGAGAT CACCTCTGAC
GCCGGGCTCT TCAGGCTCGC CCTGCACCAG CCGGGCCTGC TGCGACCGCT GTCGACCGCC
GAGCTCTCCG ACGGCACGCT GCGCTACCTG CTGCTGCTGG CTGCCCTGGG ATCTCCGCGA
CCGCCCGAGC TGCTGGTGCT CAACGAGCCC GAGACCAGCC TGCACCCGGA CCTCCTGCCG
GCCCTCGCCC GCCTGGTGCT GACGAGCGCC GAGCGGACCC AGACGATCCT CGTGACCCAC
TCCCAGATCT TGCTCGACTC CCTCGAGGAG GAGCGTCGGG CGCTGCGGTG GAAGCACACG
GTCGAGCGGG TGCACCTCGT GAAGTCCCTG GGGGAGACCG GGGTCGACGG CCGCGAGGGC
CCGCTCGACA GCCCACGGTG GGCCTGGGCC AAGCGCTGA
 
Protein sequence
MIETVAVEGY RTLRELVVEL GQLTVVTGAN GSGKSNFFRA LRLLAACGQG RVVGALAAEG 
GLPSTLWAGP QHGTRPGGVA QGTRRTAPVA LRLGFSGPDL GYAIDLGLPQ TALASPFALD
PEIKTESVWS GGVLRTATLQ AERRNGHVRT RDDGGGWTSE GRNLRTSESM IDEFVDDTGA
PEMLRVRRGL RDWRFYDQFR TDPLSPARSA QVGTQTPVLA DDGADLAAAL ETIRWMTADG
ALERAVDDAF PGSTLEITSD AGLFRLALHQ PGLLRPLSTA ELSDGTLRYL LLLAALGSPR
PPELLVLNEP ETSLHPDLLP ALARLVLTSA ERTQTILVTH SQILLDSLEE ERRALRWKHT
VERVHLVKSL GETGVDGREG PLDSPRWAWA KR