Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_08160 |
Symbol | |
ID | 8632452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 926964 |
End bp | 927794 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | LysR family regulator |
Protein accession | YP_003313601 |
Protein GI | 269794146 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0863613 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCTCAG ACCCTACCCC CGCGGACCAG CCGACCCCCG AGCCCGCGAC GACGCCGACC TTCCGGCTCG CGATCGCACC AGGCGTCACC CCCGCCAAGT GGGTCGGCGT GTGGCGTGAC AGGCTCGCCG ACGTCCCGCT CGAGCTCGTC CAGGTCGAGG TGCTCGACCG CGGTGCCGTG GTGCGGGACC GCACCGTCGA CGCCGGGCTG CTGCGCCTGC CGCTCGACCG TGAGGGTCTC AGCGTCATCC TGCTCTACAC CGAGATCCCG GTGGTGGTGG TGCCCAAGGA GCACGTGGTC GCCGCCTTCG ACCAGGTGAG CGTCGAGGAG CTCGCCGACG AGACCGTGCT GCACCCGCTC GACGACTTCC TCGAGTGGGA GGCGCTCCCG GGTACCCCGG CGGTCGAGCG CCCCGCCACG ACGGCTGCGG CGATCGAGCT CGTGGCGGCG GGTGTCGGTG TCGTGGTCGT GCCCCAGTCG GTCGCCCGGC TGCACCACCG CAAGGACCTC ACCTACCGTC CGGTGTCGGA CGGCCCCGAG TCGCGCATCG GCTTCGTGTG GCCCGAGGGC GAGACCACCG ACCTGGTCGA GGAGTTCATC GGCATCGTCC GCGGGCGCAC CGCCAACAGC TCGCGCGGCC GCGCGGCGCA GCAGGACGCC CAGAAGGCGA CGGGATCCGG CGACCAGCAG GGCAAGCCGC GCACCAAGGC GCAGGAGAAG GCCGCCGCCG TCCGGCGTGA GACCGACCGC AAGGCCGCCG CGGCCCGCAA GGCGGGCTCG CGCGGTGGCA AGCTCACCGG CAAGCGCCTC GGCAAGCGCG GCAACCGCTA G
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Protein sequence | MPSDPTPADQ PTPEPATTPT FRLAIAPGVT PAKWVGVWRD RLADVPLELV QVEVLDRGAV VRDRTVDAGL LRLPLDREGL SVILLYTEIP VVVVPKEHVV AAFDQVSVEE LADETVLHPL DDFLEWEALP GTPAVERPAT TAAAIELVAA GVGVVVVPQS VARLHHRKDL TYRPVSDGPE SRIGFVWPEG ETTDLVEEFI GIVRGRTANS SRGRAAQQDA QKATGSGDQQ GKPRTKAQEK AAAVRRETDR KAAAARKAGS RGGKLTGKRL GKRGNR
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