| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_07820 |
|---|
| Symbol | |
|---|
| ID | 8632419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 892594 |
|---|
| End bp | 894153 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | NAD(P) transhydrogenase, alpha subunit |
|---|
| Protein accession | YP_003313569 |
|---|
| Protein GI | 269794114 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.508732 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATCG GAGCACCCCG CGAGTCGCGT CCGGGGGAGA GGCTCGTCGC AGCCACCCCG
ACCACCGTCG CCCAGCTCGT CGCGCTCGGC TACGAGGTCG CGGTCGAGTC AGGGGCCGGC
GAGGAGGCGA GCTTCTCCGA CGCGAGCTAC CGCGAGGCGG GCGCGAGCGT CGTCGACCAC
GACGAGGTCT GGTCGAGCGA CGTCCTCACC TGCGTGCACG CGCCGAGCCC CGACGACGTC
GCCCGCCTGC GCCCCGGGGC GACCGTCGTC TCGATGATGG CCCCGGCCAC GCACCCGGAG
CTGGTCGACG CCTTCGCCGA GCGTGGCGTC ACCGCGCTCG CCCTCGACGC GGTGCCGCGC
ATCTCGCGAG CCCAGGCGCT CGACGTGCTG AGCACGATGT CGAACGTCGC GGGCTACCGC
GCCGTGATCG AGGCCGCCGA GGCCTACGGC GGCATGTTCG CAGGGCAGGT CACCGCCGCG
GGCAAGACCG CCCCGGCCAA GGTCTTCGTC ATCGGGGGCG GCGTCGCCGG TCTCGCGGCC
ATCGGAGCCG CGACCAGCCT CGGAGCGACG GTGCGTGCCT TCGACGTGCG CCCCGAGGCA
GGGGAGCAGA TCGAGTCGAT GGGGGCCTCG TTCGTCCAGG CGCAGGCGGC ACAGCAGGAG
GTCTCCTCAG ACGGCTACGC CCAGGCGATG ACCGACGAGC AAGAACGCCT CACCGCCGTC
ATGTACGCGC AGGAGAGCGC CCAGGCCGAC ATCGTCATCA CGACCGCGCT GGTCCGGGGC
TCCGCGCCGC GGACCCTCAC CGCCGCGATG GTCCACGCCA TGCGCCCCGG CAGCGTGATC
GTCGACCTCG CCGCCTCCGG GGGAGGCAAC TGTGAGCTCA CGGTCCCCGG CACCGTCGTC
GTCACCGACG GCGGGGTGAC GATCATCGGC TGGACCGACC TCGCCAGCCG GCTGCCCAGG
CACACGTCGC AGCTGCTCGG CACCAACATC GTCAACCTCA TGAAGCTCCT CACGCCGGGC
AAGGACGGCG AGGTCGTCCT GGACACGGAC GACGTCGTGC AGCGCGGGAT GACCGTCACC
CTCGGGGGCC AGGTGCTGTG GCCCCCGCCG CCCGTCCAGG TCTCGGCAGC GGCCCCGGCC
GCACCGGCCG CCGCCGTCCC GGTGGTCGAC CCCGTCGTCG CCGCCCGCGA GGCAGCGGAG
TCCGTACGCC GCCAGGGGCA GCGTCGCCTG GTGACGTACG GCCTGGGTGC CGTCCTCCTC
GGGCTCGCCG TCGCCTTCTC GCCACCCGCC TTCGTCGGCT TCTTCACGGT CTTCGTGCTC
GCGGTGTTCG TCGGCTACTA CGTCATCTCG AACGTGAGCC ACTCGCTGCA CACGCCCCTC
ATGGCCCAGA CGAACGCGAT CTCGGGGATC ATCCTCGTCG GCGCGCTCCT GCAGATCGGC
AGCGACGACT GGTGGGTCAC CGCCCTCGCC TTCGTCGCCG CCACGGTCGC CAGCATCAAC
ATCTTCGGCG GGTTCCTCGT GGCCAACCGC ATGATCACCA TGTTCCGGAA GGACGCCTGA
|
|---|
| Protein sequence | MRIGAPRESR PGERLVAATP TTVAQLVALG YEVAVESGAG EEASFSDASY REAGASVVDH
DEVWSSDVLT CVHAPSPDDV ARLRPGATVV SMMAPATHPE LVDAFAERGV TALALDAVPR
ISRAQALDVL STMSNVAGYR AVIEAAEAYG GMFAGQVTAA GKTAPAKVFV IGGGVAGLAA
IGAATSLGAT VRAFDVRPEA GEQIESMGAS FVQAQAAQQE VSSDGYAQAM TDEQERLTAV
MYAQESAQAD IVITTALVRG SAPRTLTAAM VHAMRPGSVI VDLAASGGGN CELTVPGTVV
VTDGGVTIIG WTDLASRLPR HTSQLLGTNI VNLMKLLTPG KDGEVVLDTD DVVQRGMTVT
LGGQVLWPPP PVQVSAAAPA APAAAVPVVD PVVAAREAAE SVRRQGQRRL VTYGLGAVLL
GLAVAFSPPA FVGFFTVFVL AVFVGYYVIS NVSHSLHTPL MAQTNAISGI ILVGALLQIG
SDDWWVTALA FVAATVASIN IFGGFLVANR MITMFRKDA
|
|---|
| |