| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_07770 |
|---|
| Symbol | |
|---|
| ID | 8632414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 884838 |
|---|
| End bp | 885806 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | uncharacterized conserved protein (DUF2332) |
|---|
| Protein accession | YP_003313564 |
|---|
| Protein GI | 269794109 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0887642 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGACGG CCGAGGTCTA CCGGACCTTC GGAGAGGTCT CCGCGCGCGG GACGTCCCCG
GTGTACGAGG ACTGGGCCGT CGGGCTCAGC GAGGACGCCG AGGTGCTCGG GCTCGTGGAC
ACCCTGCCGC GGTCGCGTCG CCAGCCGAAC CTCGTCTTCG GGTGTGCCCG GCTGCTCGGG
GTGCCTGTCG AGGCGTGGTC GCAGGTCCGC GACTGGTTCG TGGCGCACTG GGACCTCGTG
GCGAGCGAGG CGCTGACCCG CACCACCCAG ACCAACGAGG CCGGCCGCTG CGCGACCCTC
CTGCCCGTCC TGGCGGGCGT CGACGGACCG GTCGCGCTCC TCGAGGTCGG GGCCTCCGCA
GGGCTCTGCC TCTACCCGGA CCGCTACTCC TACCGCTACG TCGACGGTGC GGACGAGGTG
CGGGTCGACC CTGTGGACGG CCCGAGCGCC GTCGAGCTCA CGTGCCGCGT CGACGACCTC
GCACGCGTCC CGCGACGCCT GCCCGACGTC GTGTGGCGGG CGGGCATCGA CCTCCACCCG
CTCGACATCA CCGACCCCGA CGACGCCGCG TGGCTCGACG CGCTCGTCTG GCCCGAGCAC
GACGACCGCC GAGCACGCCT CGCCGCAGCC GTCTCGGTGG TCGCCGCCGA GCCGCCGCTG
CTCGTCGCCG GAGACCTGCT CGACGCGCTG CCAGGCCTCG TCGCCCAGGC CCCTGCCGGC
GCGACGCTCG TGGTGCAGCA CTCCGCCGTG CTGACCTACG TCGACCTCGC GGTGCGCGAG
AGGTTCGCCA CCCGGGTGCG CGAGCTGGGC GCGGTGTGGC TGAGCAACGA GGGGGTCGGG
GTGCTGCCCC AGGTCGCCGA GACGCTCCCG CCCGGGACAG ACGTCGGCGG GCGGTTCGTC
GTCGCGCAGG ACGGGGTGGC CGTCGCGCTC GCGGAGCAGC ACGGGCGCGG GTTCGCTCGG
CTGCGGTGA
|
|---|
| Protein sequence | MGTAEVYRTF GEVSARGTSP VYEDWAVGLS EDAEVLGLVD TLPRSRRQPN LVFGCARLLG
VPVEAWSQVR DWFVAHWDLV ASEALTRTTQ TNEAGRCATL LPVLAGVDGP VALLEVGASA
GLCLYPDRYS YRYVDGADEV RVDPVDGPSA VELTCRVDDL ARVPRRLPDV VWRAGIDLHP
LDITDPDDAA WLDALVWPEH DDRRARLAAA VSVVAAEPPL LVAGDLLDAL PGLVAQAPAG
ATLVVQHSAV LTYVDLAVRE RFATRVRELG AVWLSNEGVG VLPQVAETLP PGTDVGGRFV
VAQDGVAVAL AEQHGRGFAR LR
|
|---|
| |