Gene Sked_07730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07730 
Symbol 
ID8632410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp880270 
End bp881655 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content70% 
IMG OID 
Productgluconate transporter 
Protein accessionYP_003313560 
Protein GI269794105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.619912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0357152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACT GGACACAACC CCTGGGGACC ACCCCGCTCC TGCTCATCGC CGCTGCGGCC 
ATCCTCGTGG TGCTGGTCCT CATCATCCGG TTCAAGGTCC ACGCCTTCCT CACCCTCGTG
GTGGTGTCGC TCCTCACAGC GTTCGCGACG GGCCTCCCGC TCGAGGACCT CCTCACGGTG
CTCACCGAGG ACGGCTTCGG CAAGACCCTC GCGAACGTCG CCCTGCTCAT CGGCCTCGGG
GCGATGCTCG GCAAGCTCGT CGAGCACAGC GGCGGGGCCA AGTCGCTCGC CGACGGCCTC
GTCCGGGTGT TCGGCGAGAA GCGCGCCGTG CTGGCGCTGG GCCTCGCGTC GCTCGCGATG
GGCTTCCCGA TGTTCTTCGA CGCCGGGCTC ATCGTCATGC TCCCGGTGAT CTTCGCGGTC
GCCCGCCGCC TCGGCGGCAA CGTCCTCGCG TACGGCATCC CTGCCGCCGC GGCCTTCTCC
GTGATGCACG TGTTCGTCCC GCCGCACCCC GGACCGGTCA GCGCGAGCGA GCTCTACGGC
GCGAACCTCG GGCTCGTCCT GCTCCTCGGG CTCCTCCTCG TGGCTCCCGT CTGGTACGTC
TCCGGTTACC TGTGGGGTGG CTACGTCGGC AGGAAGTACA ACCTGCCCGT GCCCGACTTC
TTCGGAGCCG ACGTCACGGA CGGCGACGAC GTCACCGTCC CGCCGAAGCC GAGCACCGTC
ATCGCCGTGC TCCTGCTGCC GCTCGTCCTC ATCTTCATGA ACACCGGCCT GAGCTCCCTC
GCCTCCGTCG GTGCGGTCGA CGCCGAGGCC ACCTGGGTCC AGGTCCTCGT GATCATCGGT
TCCGCCCCGG TCGCCCTGCT CATCTCGGTG CTCGTCGCGA CCTTCGTGCT CGGCACCCGC
CGTGGCGAGA GCGGCTCGGC CGTCGAGCGG GTCCTCGACT CGTCCCTCGG CCCCGTCTGC
TCGGTCATCC TCATCACCGG TGCCGGTGGC ATGTTCGGTG CCGTGCTGCG TGCCTCCGGG
ATCGGCGACG CGCTCTCCGA CTCGCTGGCC TCGATCGGCC TGCCCGTCAT CGTGGCCGCG
TACCTCGTCG CCGTGGTGCT GCGCGTCGCC CAGGGCTCGG CGACCGTCGC CCTGGTGACC
ACCGCCGGGC TCATGGCACC GGCGGTCGTC GCGGGGGACT TCAGCGGGAT GCAGATCGCG
GCGATCACCA TCGCCACGGC CGCGGGCTCG ACCTTCGCCA GCCACGTCAA CGACTCCGGT
TTCTGGCTCG TCGGACGCCT CATGGGGATG GACGTCAAGA CCACCCTCAA GACGTGGACG
GTGCAGCAGT CGATCCAGTC CGTCATCGCC TTCGCGCTCG CTGCCGCAGT ATTCTCGGTC
GTGTGA
 
Protein sequence
MDDWTQPLGT TPLLLIAAAA ILVVLVLIIR FKVHAFLTLV VVSLLTAFAT GLPLEDLLTV 
LTEDGFGKTL ANVALLIGLG AMLGKLVEHS GGAKSLADGL VRVFGEKRAV LALGLASLAM
GFPMFFDAGL IVMLPVIFAV ARRLGGNVLA YGIPAAAAFS VMHVFVPPHP GPVSASELYG
ANLGLVLLLG LLLVAPVWYV SGYLWGGYVG RKYNLPVPDF FGADVTDGDD VTVPPKPSTV
IAVLLLPLVL IFMNTGLSSL ASVGAVDAEA TWVQVLVIIG SAPVALLISV LVATFVLGTR
RGESGSAVER VLDSSLGPVC SVILITGAGG MFGAVLRASG IGDALSDSLA SIGLPVIVAA
YLVAVVLRVA QGSATVALVT TAGLMAPAVV AGDFSGMQIA AITIATAAGS TFASHVNDSG
FWLVGRLMGM DVKTTLKTWT VQQSIQSVIA FALAAAVFSV V