Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_07730 |
Symbol | |
ID | 8632410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 880270 |
End bp | 881655 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | gluconate transporter |
Protein accession | YP_003313560 |
Protein GI | 269794105 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.619912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0357152 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGACT GGACACAACC CCTGGGGACC ACCCCGCTCC TGCTCATCGC CGCTGCGGCC ATCCTCGTGG TGCTGGTCCT CATCATCCGG TTCAAGGTCC ACGCCTTCCT CACCCTCGTG GTGGTGTCGC TCCTCACAGC GTTCGCGACG GGCCTCCCGC TCGAGGACCT CCTCACGGTG CTCACCGAGG ACGGCTTCGG CAAGACCCTC GCGAACGTCG CCCTGCTCAT CGGCCTCGGG GCGATGCTCG GCAAGCTCGT CGAGCACAGC GGCGGGGCCA AGTCGCTCGC CGACGGCCTC GTCCGGGTGT TCGGCGAGAA GCGCGCCGTG CTGGCGCTGG GCCTCGCGTC GCTCGCGATG GGCTTCCCGA TGTTCTTCGA CGCCGGGCTC ATCGTCATGC TCCCGGTGAT CTTCGCGGTC GCCCGCCGCC TCGGCGGCAA CGTCCTCGCG TACGGCATCC CTGCCGCCGC GGCCTTCTCC GTGATGCACG TGTTCGTCCC GCCGCACCCC GGACCGGTCA GCGCGAGCGA GCTCTACGGC GCGAACCTCG GGCTCGTCCT GCTCCTCGGG CTCCTCCTCG TGGCTCCCGT CTGGTACGTC TCCGGTTACC TGTGGGGTGG CTACGTCGGC AGGAAGTACA ACCTGCCCGT GCCCGACTTC TTCGGAGCCG ACGTCACGGA CGGCGACGAC GTCACCGTCC CGCCGAAGCC GAGCACCGTC ATCGCCGTGC TCCTGCTGCC GCTCGTCCTC ATCTTCATGA ACACCGGCCT GAGCTCCCTC GCCTCCGTCG GTGCGGTCGA CGCCGAGGCC ACCTGGGTCC AGGTCCTCGT GATCATCGGT TCCGCCCCGG TCGCCCTGCT CATCTCGGTG CTCGTCGCGA CCTTCGTGCT CGGCACCCGC CGTGGCGAGA GCGGCTCGGC CGTCGAGCGG GTCCTCGACT CGTCCCTCGG CCCCGTCTGC TCGGTCATCC TCATCACCGG TGCCGGTGGC ATGTTCGGTG CCGTGCTGCG TGCCTCCGGG ATCGGCGACG CGCTCTCCGA CTCGCTGGCC TCGATCGGCC TGCCCGTCAT CGTGGCCGCG TACCTCGTCG CCGTGGTGCT GCGCGTCGCC CAGGGCTCGG CGACCGTCGC CCTGGTGACC ACCGCCGGGC TCATGGCACC GGCGGTCGTC GCGGGGGACT TCAGCGGGAT GCAGATCGCG GCGATCACCA TCGCCACGGC CGCGGGCTCG ACCTTCGCCA GCCACGTCAA CGACTCCGGT TTCTGGCTCG TCGGACGCCT CATGGGGATG GACGTCAAGA CCACCCTCAA GACGTGGACG GTGCAGCAGT CGATCCAGTC CGTCATCGCC TTCGCGCTCG CTGCCGCAGT ATTCTCGGTC GTGTGA
|
Protein sequence | MDDWTQPLGT TPLLLIAAAA ILVVLVLIIR FKVHAFLTLV VVSLLTAFAT GLPLEDLLTV LTEDGFGKTL ANVALLIGLG AMLGKLVEHS GGAKSLADGL VRVFGEKRAV LALGLASLAM GFPMFFDAGL IVMLPVIFAV ARRLGGNVLA YGIPAAAAFS VMHVFVPPHP GPVSASELYG ANLGLVLLLG LLLVAPVWYV SGYLWGGYVG RKYNLPVPDF FGADVTDGDD VTVPPKPSTV IAVLLLPLVL IFMNTGLSSL ASVGAVDAEA TWVQVLVIIG SAPVALLISV LVATFVLGTR RGESGSAVER VLDSSLGPVC SVILITGAGG MFGAVLRASG IGDALSDSLA SIGLPVIVAA YLVAVVLRVA QGSATVALVT TAGLMAPAVV AGDFSGMQIA AITIATAAGS TFASHVNDSG FWLVGRLMGM DVKTTLKTWT VQQSIQSVIA FALAAAVFSV V
|
| |