Gene Sked_07720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07720 
Symbol 
ID8632409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp878915 
End bp880105 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content74% 
IMG OID 
ProductUDP-N-acetylmuramate dehydrogenase 
Protein accessionYP_003313559 
Protein GI269794104 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0534331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGG ACCTGAGAAC GCTCGCCGAG CCCACCTTCG CCGACCTCAC GACGCTGCGC 
GTCGGCGGGG ACATGGACAC CCTGGTGCGC ACCAGCACCG AGGCCGAGCT CATCGACGCG
GTCCGCGCGG CCGACGACGC CGGTGAGCCC GTGCTGATCC TCGGCGGGGG CTCCAACCTG
CTCGTCGCCG ACGAGGGCTT CGCGGGTGTG GTCATCCAGG ACCAGCGCTC CGGCCTGCGG
GTCGAGAGCG CGGACTCCTG CGGCGGCGCG AACCTCACGG CGCCCGCCGG GCACAGCATG
GACGCCCTGG TCGCCGAGGC CGTCGAGCGC GAGTGGGTGG GCATCGAGTC GCTCTCCGGG
ATCCCCGGCA CGGTCGGCGC GGCCCCGGTC CAGAACATCG GGGCCTACGG CCAGGAGCTC
TCGGGGTCGG TCGCCAACGT CCGCGTCTGG GACCGGGGGC AGAGCCGCGT GCGCACCCTC
TCGCTGGTCG ACCTCGACTT CGGGTACCGC ACGTCGATGC TCAAGCGCTC GACCCAGATG
CCGCACTCGC GCGGCGGTGA GCCGGGCGAC GTCGACCCCC GCGCCCCCTG GTACCCGAGC
CCGCGGTACG TGGTGCTCGA CGTGAGCTTC CAGCTGCGCC TGGGCTCGCT CTCCGCCCCG
GTCGTCTACC CCGAGCTCGC ACGCCGCCTC GGCGTCGACG AGGGCGCGCG CGCCGACACC
TCCGAGGTGC GCGAGGCCGT CCTGGCGCTG CGCGGCAGCA AGGGCATGCT CCTCGACTCC
GGGGACGGCG CCCCCGACCA CGACCGCTGG AGCGCCGGGT CCTTCTTCAC CAACCCGATC
ATCCCGGCCG ACCTCGTCGC CGACCTCCCC GAGGGCATCC CGGTCTTCCC GGTCCGCACC
GCCACCCCGA CGACCACGAC GGGGCCCGCG CTGGGCACCG TCGACCCGAG CGTGGTCAAG
GTCTCGGCCG CGTGGCTCAT CGAGCAGGCC GGCTTCGGCA AGGGCTTCGG GGTCAACGGT
CCCGACAGCG CGGCGACGGT CTCGACCAAG CACACGCTGG CGCTGACCAA CCGCGGTCAC
GCGACCGCGG ACGACGTGGT CCGCCTGGCA CGCGAGGTGC GCGCGGGGGT CGACGCGGCC
TTCGGCATCG AGCTCGTCCC CGAGCCGGTG CTGGTGGGCG TCGCGCTCTG A
 
Protein sequence
MTEDLRTLAE PTFADLTTLR VGGDMDTLVR TSTEAELIDA VRAADDAGEP VLILGGGSNL 
LVADEGFAGV VIQDQRSGLR VESADSCGGA NLTAPAGHSM DALVAEAVER EWVGIESLSG
IPGTVGAAPV QNIGAYGQEL SGSVANVRVW DRGQSRVRTL SLVDLDFGYR TSMLKRSTQM
PHSRGGEPGD VDPRAPWYPS PRYVVLDVSF QLRLGSLSAP VVYPELARRL GVDEGARADT
SEVREAVLAL RGSKGMLLDS GDGAPDHDRW SAGSFFTNPI IPADLVADLP EGIPVFPVRT
ATPTTTTGPA LGTVDPSVVK VSAAWLIEQA GFGKGFGVNG PDSAATVSTK HTLALTNRGH
ATADDVVRLA REVRAGVDAA FGIELVPEPV LVGVAL