Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_07540 |
Symbol | |
ID | 8632391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 862423 |
End bp | 864267 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | FHA domain-containing protein |
Protein accession | YP_003313544 |
Protein GI | 269794089 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.118463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGATCA GCTACGCGCC CGGAACGGCT TTCGCCCTGG TCCGACCGGG GGTGGTCGTG CTCCTCGACG GCTCCGTCGC GGCGGCCTCG GTGTCGTCGG TCTGGGCGTC GCTCGAGCGG CTCGGACGTC CCGAGACGAG CATGGCTGAC GTCCTCGACG CCGTCACGAC GGTCCTCGAC CCCTCCCTGC GCGAGCTGCC CGACTTCGCG ATCGTCCTGC ACGAGGTGGC GGCAGGAGGC GAGGAGACCG GTGTGCTGCA CGTCGTCGCC CGCGGCACCG TGTCGGTGCA CCTCGCCGGC GAGGTCGGCA GCGAGACCAT CGAGGCCTTC GACATGACCA CCTGGGCCGA CAAGCGCTTC ACCGACGTCG ACCACTACGA GGTCGCCACC GGCCCGACGG GCCTGCCGGC CGAGCTCTCG CTCGCGCTGA GCACAGGAGT GGTCACCGCG AGGTCCGTCA GCTGGCAGCG CCCGGCCGAG GCGCCGTCCG CGGGCGACCA CGAGGCACCG GCCGTCCCGG CGGAGGTCGG CGACGCCGGC TCGGGCAGCG AGGTCCCGGC CCCGCAGGCC GTGGTCGCGA CCGTCGAGCC CGTCGCGGAG CCCGACCCTG CCATGGTGCC GGTGCACCCG GCCGAGCCGG ACTTCGCCCG CACGCTCGGC GAGTTCCCGG ACGGAGCCCT CGATGACGGA GCCCTCGACG ACGTAGCTCT CGACGACGAC TTCGTCGACC ACGGCTCTCG TGACGGTGCA CCGTCCGACG AGGACCTCCC CGCCGGTGCT GAGATCCCTG CGGACGAGGC GCCGGCTGCC GAGAGCCTTG CCGGCGCGAG CGCCGCCGCC GAGGAGCCCG TGCCCGACGA CGCGACGGTG GACGGCACGG CCGACGCGCT CGCAACGGCC GACGCGCTCG CCGTGGCCGG AGGCAGCGCA CCGGCTCCCG AGGAGCCGGA GCACGACGAG ACCGGCGGCG GCGCCGGCGA CGACGAGGAG GTCGAGGACG ACACCGTGCT CTCGATCGAC GGCCTGCGCA GCTTCATGAA GGACCGGGAC GGGGCCGCCC CCGTGACCGC CGAGCCGACG GACGTGGCTC CGCAGCCGGT GCGTCCGGCG CTGCCCCCGG TGCCCCCGCC GCCGCCCGCG CCCCCGGTCG AGCAGGAAAC CCCGGCTGCT CAGCAGCAGG CTCCGGTCGG CTCCGGCGAC TCGCCCTACC CGGTGTACCA GGCTGCGCCC CAGACCCCGC CCGGTGAGGC GTATGCCCCT GCGCCTCAGA CACCGCCCGG CGAGTCCTAC GCCCCTGTGC CTCAGCAGTG GACGGTCCAG CTCCCGGGGA CGCCGGTGGC GCCCGCCGCC GTGGTCGGTC CGGCCCCCGT GCCTGCGGCC GACGTCCCGA CGATCCTGGC GCGCAGCTGC GCCTACGGGC ACGCCAACAC CCCGGTCCGC TCGACCTGCG CCGTGTGCGG GGGAGGGCTC AACCCGCAGG CCGAGGTCGT GCCCCGTCCG TCGCTCGGCC GCGTCGTGAT CTCGACCGGC GACGTCGTCG AGCTCGAGCA GCCCGTCGTG TTCGGCCGCT ACCCGCAGGC GCACGTGGTC ACCGCCCAGG CGCAAGCACC TCGCCTGGTC ACGGTCCCGA GCCCCAGCCA GGACATCTCG CGGTCGCACC TTGAGGTGCG GCTCGAGGGC TGGAACGTGC TGCTGGTCGA CCTGACCACC GTCAACGGGA CCACCCTCCT GCGCCCGGGG CAGCCGCCGC GCCGCCTGCA CCCGCAGGAG CCCACGCTCG TGGTGAGCGG CGACGTCGCG GACCTCGGCG ACGGCGTCCG CCTGACCTTC GAGGGCGTCG CGTGA
|
Protein sequence | MSISYAPGTA FALVRPGVVV LLDGSVAAAS VSSVWASLER LGRPETSMAD VLDAVTTVLD PSLRELPDFA IVLHEVAAGG EETGVLHVVA RGTVSVHLAG EVGSETIEAF DMTTWADKRF TDVDHYEVAT GPTGLPAELS LALSTGVVTA RSVSWQRPAE APSAGDHEAP AVPAEVGDAG SGSEVPAPQA VVATVEPVAE PDPAMVPVHP AEPDFARTLG EFPDGALDDG ALDDVALDDD FVDHGSRDGA PSDEDLPAGA EIPADEAPAA ESLAGASAAA EEPVPDDATV DGTADALATA DALAVAGGSA PAPEEPEHDE TGGGAGDDEE VEDDTVLSID GLRSFMKDRD GAAPVTAEPT DVAPQPVRPA LPPVPPPPPA PPVEQETPAA QQQAPVGSGD SPYPVYQAAP QTPPGEAYAP APQTPPGESY APVPQQWTVQ LPGTPVAPAA VVGPAPVPAA DVPTILARSC AYGHANTPVR STCAVCGGGL NPQAEVVPRP SLGRVVISTG DVVELEQPVV FGRYPQAHVV TAQAQAPRLV TVPSPSQDIS RSHLEVRLEG WNVLLVDLTT VNGTTLLRPG QPPRRLHPQE PTLVVSGDVA DLGDGVRLTF EGVA
|
| |