Gene Sked_07540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07540 
Symbol 
ID8632391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp862423 
End bp864267 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content75% 
IMG OID 
ProductFHA domain-containing protein 
Protein accessionYP_003313544 
Protein GI269794089 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.118463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCA GCTACGCGCC CGGAACGGCT TTCGCCCTGG TCCGACCGGG GGTGGTCGTG 
CTCCTCGACG GCTCCGTCGC GGCGGCCTCG GTGTCGTCGG TCTGGGCGTC GCTCGAGCGG
CTCGGACGTC CCGAGACGAG CATGGCTGAC GTCCTCGACG CCGTCACGAC GGTCCTCGAC
CCCTCCCTGC GCGAGCTGCC CGACTTCGCG ATCGTCCTGC ACGAGGTGGC GGCAGGAGGC
GAGGAGACCG GTGTGCTGCA CGTCGTCGCC CGCGGCACCG TGTCGGTGCA CCTCGCCGGC
GAGGTCGGCA GCGAGACCAT CGAGGCCTTC GACATGACCA CCTGGGCCGA CAAGCGCTTC
ACCGACGTCG ACCACTACGA GGTCGCCACC GGCCCGACGG GCCTGCCGGC CGAGCTCTCG
CTCGCGCTGA GCACAGGAGT GGTCACCGCG AGGTCCGTCA GCTGGCAGCG CCCGGCCGAG
GCGCCGTCCG CGGGCGACCA CGAGGCACCG GCCGTCCCGG CGGAGGTCGG CGACGCCGGC
TCGGGCAGCG AGGTCCCGGC CCCGCAGGCC GTGGTCGCGA CCGTCGAGCC CGTCGCGGAG
CCCGACCCTG CCATGGTGCC GGTGCACCCG GCCGAGCCGG ACTTCGCCCG CACGCTCGGC
GAGTTCCCGG ACGGAGCCCT CGATGACGGA GCCCTCGACG ACGTAGCTCT CGACGACGAC
TTCGTCGACC ACGGCTCTCG TGACGGTGCA CCGTCCGACG AGGACCTCCC CGCCGGTGCT
GAGATCCCTG CGGACGAGGC GCCGGCTGCC GAGAGCCTTG CCGGCGCGAG CGCCGCCGCC
GAGGAGCCCG TGCCCGACGA CGCGACGGTG GACGGCACGG CCGACGCGCT CGCAACGGCC
GACGCGCTCG CCGTGGCCGG AGGCAGCGCA CCGGCTCCCG AGGAGCCGGA GCACGACGAG
ACCGGCGGCG GCGCCGGCGA CGACGAGGAG GTCGAGGACG ACACCGTGCT CTCGATCGAC
GGCCTGCGCA GCTTCATGAA GGACCGGGAC GGGGCCGCCC CCGTGACCGC CGAGCCGACG
GACGTGGCTC CGCAGCCGGT GCGTCCGGCG CTGCCCCCGG TGCCCCCGCC GCCGCCCGCG
CCCCCGGTCG AGCAGGAAAC CCCGGCTGCT CAGCAGCAGG CTCCGGTCGG CTCCGGCGAC
TCGCCCTACC CGGTGTACCA GGCTGCGCCC CAGACCCCGC CCGGTGAGGC GTATGCCCCT
GCGCCTCAGA CACCGCCCGG CGAGTCCTAC GCCCCTGTGC CTCAGCAGTG GACGGTCCAG
CTCCCGGGGA CGCCGGTGGC GCCCGCCGCC GTGGTCGGTC CGGCCCCCGT GCCTGCGGCC
GACGTCCCGA CGATCCTGGC GCGCAGCTGC GCCTACGGGC ACGCCAACAC CCCGGTCCGC
TCGACCTGCG CCGTGTGCGG GGGAGGGCTC AACCCGCAGG CCGAGGTCGT GCCCCGTCCG
TCGCTCGGCC GCGTCGTGAT CTCGACCGGC GACGTCGTCG AGCTCGAGCA GCCCGTCGTG
TTCGGCCGCT ACCCGCAGGC GCACGTGGTC ACCGCCCAGG CGCAAGCACC TCGCCTGGTC
ACGGTCCCGA GCCCCAGCCA GGACATCTCG CGGTCGCACC TTGAGGTGCG GCTCGAGGGC
TGGAACGTGC TGCTGGTCGA CCTGACCACC GTCAACGGGA CCACCCTCCT GCGCCCGGGG
CAGCCGCCGC GCCGCCTGCA CCCGCAGGAG CCCACGCTCG TGGTGAGCGG CGACGTCGCG
GACCTCGGCG ACGGCGTCCG CCTGACCTTC GAGGGCGTCG CGTGA
 
Protein sequence
MSISYAPGTA FALVRPGVVV LLDGSVAAAS VSSVWASLER LGRPETSMAD VLDAVTTVLD 
PSLRELPDFA IVLHEVAAGG EETGVLHVVA RGTVSVHLAG EVGSETIEAF DMTTWADKRF
TDVDHYEVAT GPTGLPAELS LALSTGVVTA RSVSWQRPAE APSAGDHEAP AVPAEVGDAG
SGSEVPAPQA VVATVEPVAE PDPAMVPVHP AEPDFARTLG EFPDGALDDG ALDDVALDDD
FVDHGSRDGA PSDEDLPAGA EIPADEAPAA ESLAGASAAA EEPVPDDATV DGTADALATA
DALAVAGGSA PAPEEPEHDE TGGGAGDDEE VEDDTVLSID GLRSFMKDRD GAAPVTAEPT
DVAPQPVRPA LPPVPPPPPA PPVEQETPAA QQQAPVGSGD SPYPVYQAAP QTPPGEAYAP
APQTPPGESY APVPQQWTVQ LPGTPVAPAA VVGPAPVPAA DVPTILARSC AYGHANTPVR
STCAVCGGGL NPQAEVVPRP SLGRVVISTG DVVELEQPVV FGRYPQAHVV TAQAQAPRLV
TVPSPSQDIS RSHLEVRLEG WNVLLVDLTT VNGTTLLRPG QPPRRLHPQE PTLVVSGDVA
DLGDGVRLTF EGVA