Gene Sked_07510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07510 
Symbol 
ID8632388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp858273 
End bp860078 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content72% 
IMG OID 
Productproton-translocating NADH-quinone oxidoreductase, chain N 
Protein accessionYP_003313541 
Protein GI269794086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0423349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCA CGACAGCCGC CGTAGCGGCC GGCTCCGCGG CTGCTGCCGC CACGGCCACG 
GGGACCTTCA CGCCGCCCGA GGTCCAGTGG ACGGCGCTGG CACCGCTGCT CGTCGTCTTC
GGGGCCGGCG TCGTCGCCGT CCTCGTCGAG TCCTTCGCAC CGGCCCGGCT GCGCCGCACC
ATCCAGGTGC CGCTCACCCT CGTGGCGCTC GTGGCCGCGC TCGCCGTCGT CGTGTGGCAG
GGCGTCTCGT GGCTCGGCCC CGGCAGCCGG GGCGGGGTCG TCGTGCTCGG CGGGTCCCTC
GTGATCGAGG GCATCTCGCT GCTGTTCCAG GGCATCATCC TGGTCGTCGC GGTCCTGGCG
GTCCTCGTGG TGGTCGACCG CAGCCCGGGC GGGCAGGACG CCTTCGCGCC GAGCGCCGCG
GCGATCCCCG GCTCCGACTA CGAGGAGCTC GCCCGCCGTC GCGGGCTCCA GCAGACCGAG
GTCTTCCCGC TCCTGCTCTT CGCGATCGGC GGGATGCTCA TCTTCCCGGC GGCCGCCGAC
CTGCTCACCA TGTTCATCGC CCTCGAGGTG CTCTCGCTCC CGCTGTACGT CATGTGCGGG
ATGGCGCGGC GTCGCCGGCT GCTCTCGCAG GAGGCGTCCT TCAAGTACTT CGTGCTGGGG
GCCTTCGCCT CGGCGGTCTT CCTCTTCGGC TCGGCGCTGC TCTACGGCTA CGCGGGCTCG
GTCCGGTTCA GCGACATCTT CACGGCGTCG AGCACCGTCG CGCAGGGCGG GTCCCCCGAG
GGCTGGGAGC TGCTGTGGCT CGTCGGCTTC CTCATGGTGG TCTGCGGGCT GCTGTTCAAG
GTCGGTGCGG TGCCCTTCCA GGCCTGGGTG CCCGACGTCT ACCAGGGCGC CCCGACGGCC
ATCACCGGCT TCATGGCCGC CTGCACCAAG ATCGCCGCCT TCGGTGCACT CGTGCGCATC
CTGTGGTTCG GCGGCTTCGG CGGGACGCTC GACATGCTCG TCTCCGTCAA GACCGCGCTG
TGGGTCGTGG CCATCGCGAC CATGGCGGTC GGCGTCGTCG TCGGTGCGAC CCAGACCGAC
ATGAAGCGCA TGCTCGGGTA CTCCTCGATC GCCCACGCCG GGTTCGTGCT CGTGGCGGTC
CTCGGCTTCA ACACCGACGG CATCGTCGCG GTGCTCTTCT ACCTCGCGGC CTACGGCCTC
GCCACGGTCG GCGCCTTCGG CGTCGTCACG CTGGTGCGCG AGACCGGCAG TGGGGGAGAG
GTCCTCGGCG AGGCCACGCA CCTGGGCCAG TGGGCCGGCC TCGGCAAGCG CAGCCCGTGG
CTCGCGGCCT GCTTCTCGGT GTTCCTGCTG TCCTTCGCCG GGATCCCGCT CACCGCAGGG
TTCATCGCGA AGTTCGGGGC GTTCTCGGCC GCTGTGCAGG GGAGCGAGCA GCTGGGGACC
GGCGAGGTCC TCGCCGTCGT CGGCGTGCTC GCGTCGGCCG TCGCGGTGTT CTTCTACATC
CGCATCATCG TCATCATGTT CTTCATGGAC CCGGCCGGGT CCGACGCGGC GAGCCCGGTG
GTCGACGCGG ACTCGGGGAT CGAGGGCGCG ACCGAGGGCT CTGCCGACCT CGCGCCCGAC
GGCACCTCGA CCAGCCCGGC GACGACGTCC GTGCTGCTCG CCGACGGGGC GCCGCGCGTC
ACGGTGGTGG GCGGCTTCGG CCCGACGGCC GTCGCGGTGG CGGTCACCGC GGTCGCGGTC
GTGGTGCTCG GTGTGTACCC CACCCCGCTG CTCGAGCTCA TCGGCTGGGC GACCGGCCTG
GGCTGA
 
Protein sequence
MIATTAAVAA GSAAAAATAT GTFTPPEVQW TALAPLLVVF GAGVVAVLVE SFAPARLRRT 
IQVPLTLVAL VAALAVVVWQ GVSWLGPGSR GGVVVLGGSL VIEGISLLFQ GIILVVAVLA
VLVVVDRSPG GQDAFAPSAA AIPGSDYEEL ARRRGLQQTE VFPLLLFAIG GMLIFPAAAD
LLTMFIALEV LSLPLYVMCG MARRRRLLSQ EASFKYFVLG AFASAVFLFG SALLYGYAGS
VRFSDIFTAS STVAQGGSPE GWELLWLVGF LMVVCGLLFK VGAVPFQAWV PDVYQGAPTA
ITGFMAACTK IAAFGALVRI LWFGGFGGTL DMLVSVKTAL WVVAIATMAV GVVVGATQTD
MKRMLGYSSI AHAGFVLVAV LGFNTDGIVA VLFYLAAYGL ATVGAFGVVT LVRETGSGGE
VLGEATHLGQ WAGLGKRSPW LAACFSVFLL SFAGIPLTAG FIAKFGAFSA AVQGSEQLGT
GEVLAVVGVL ASAVAVFFYI RIIVIMFFMD PAGSDAASPV VDADSGIEGA TEGSADLAPD
GTSTSPATTS VLLADGAPRV TVVGGFGPTA VAVAVTAVAV VVLGVYPTPL LELIGWATGL
G