Gene Sked_07470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07470 
Symbol 
ID8632384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp853444 
End bp854316 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content73% 
IMG OID 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_003313537 
Protein GI269794082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0208664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAGCG GGGCGGAGGC CGTCCTCTTC TGGTGCCTCG CACCCCTCAT GGTGGTCGCA 
GCGCTCGGCC TGCTCTTCGC CCGCAAGGCC GTGCACGCCA CGCTCTGCGT CGTCTTCGTC
ATGGTGTGCC TGGCGGTCAT GTACGTCGCC CTCGAGGCGC CGTTCCTCGG CATCGTGCAG
ATCGTCGTCT ACACCGGCGC CGTGATGATG CTCTTCCTCT TCGTCATCAT GCTCGTCGGC
GTCGACGCCT CGGACTCGCT GGTCGAGACC ATCCGTGGGC AGCGGCTCGT CGGCTGGCTG
CTCGGCCTCG GCCTCGGCGC GGTCCTGGTC GGCGTGATCC TGCGGGTGTC CTTCCCGGAG
GGCATCGGCC TGGAGGCCGC CAACGCCGAG ACCAACCCCG TCGCGATCGC CCGCGTGCTG
TTCGGCGACT TCGTGTTCAA CCTCGAGGTG GTCGGCATCC TGCTCATCAC GGCCGCGCTC
GCGGCCCTCA CGCTCACCCA CAAGCAGCGG CTCACGGCGC GCGTGGGGCA GAAGGAGCGC
GCCGACGCGC GGGTCGCCAG CGGCGAGTCG CTCGTCCCGC TGCCCGCCCC GGGCGTCTAC
GCCCAGCGCA ACGCGATGGA CGTGCCGGCG CTCGACCCGC AGGGACGCCC GATCGAGGCG
TCCGTGTCGC GGGTGCTGCG CGTCCGCGGC CAGGAGCGCC AGGCGCCGGT AGACGGCGAG
ATCGCGAACC AGTCCGAGCA GGGCCCGCGG GTGTCCGGCA GCGAGACCCA GGGCCCCCAG
GGTCAGGTCG AGACCGGTGC CCCGGTCGAG CCGCCCGAGG ACCCGTCTCC CGCCAGCCCG
CCCCCGCCCC GGACCACCGA GGAGGAGCGC TGA
 
Protein sequence
MTSGAEAVLF WCLAPLMVVA ALGLLFARKA VHATLCVVFV MVCLAVMYVA LEAPFLGIVQ 
IVVYTGAVMM LFLFVIMLVG VDASDSLVET IRGQRLVGWL LGLGLGAVLV GVILRVSFPE
GIGLEAANAE TNPVAIARVL FGDFVFNLEV VGILLITAAL AALTLTHKQR LTARVGQKER
ADARVASGES LVPLPAPGVY AQRNAMDVPA LDPQGRPIEA SVSRVLRVRG QERQAPVDGE
IANQSEQGPR VSGSETQGPQ GQVETGAPVE PPEDPSPASP PPPRTTEEER