Gene Sked_07460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07460 
Symbol 
ID8632383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp852689 
End bp853447 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content73% 
IMG OID 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_003313536 
Protein GI269794081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0206751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACC GCAGCACGCC CGGACCGGGC AGCACCCCCG AGCCCGGCAC CACGAGCCCC 
GGCTACCAGC AGCTGCGCCC GAAGCCCACG GGGGTCCGCG AGCTCGTCGC CCCGGTCGCC
GGCTTCGGGG TCACCTTCTC GTCGATGTTC CGGCCGACGG TGACCGAGCA GTACCCCTTC
GAGAAGGTCC CGACCAAGCC CCGGTACCAC GGGCGTCACC AGCTCAACCG CTACGCCGAC
GGCCTCGAGA AGTGCATCGG GTGCGAGCTC TGCGCCTGGG CGTGCCCGGC CGACGCCATC
TACGTCGAGG GCTCTAGCAA CGCCGAGCTC CCCGACGGCG GCCACAGGTC GCCGGGGGAG
CGGTACGGGA GCGTCTACCA GATCAACTAC CTGCGCTGCA TCTTCTGCGG GCTGTGCATC
GAGGCCTGCC CCACGCGCGC CCTCACCATG ACCAACGAGT ACGAGCTCAC CGGCCCCACC
CGCGAGGGGC TCATCTGGGA GAAGGAGGAC CTCTTGGCCC CGCTGCGCGA CGGCATGCTC
GCCGCACCGC ACCCCATGGT CCCCGGGACC GAGGACACCC AGTACTACCG CGGCGAGGTC
ACCGGCCCGA CCCCCGAGCA GGTCGCCTGG GTCGCCGAGC ACCGCCCCGA CGACCCGACG
CTCGACGCGG CCCGCGCCGC GGCGGGCCAG GGCACCGCCA CCGCCACCGC CTCGTCAGCC
GGGACACCGG CCGCCGCGAC CGGGACGGTC CGCTCGTGA
 
Protein sequence
MSDRSTPGPG STPEPGTTSP GYQQLRPKPT GVRELVAPVA GFGVTFSSMF RPTVTEQYPF 
EKVPTKPRYH GRHQLNRYAD GLEKCIGCEL CAWACPADAI YVEGSSNAEL PDGGHRSPGE
RYGSVYQINY LRCIFCGLCI EACPTRALTM TNEYELTGPT REGLIWEKED LLAPLRDGML
AAPHPMVPGT EDTQYYRGEV TGPTPEQVAW VAEHRPDDPT LDAARAAAGQ GTATATASSA
GTPAAATGTV RS