Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_07410 |
Symbol | |
ID | 8632378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 845060 |
End bp | 846412 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | NADH dehydrogenase subunit D |
Protein accession | YP_003313531 |
Protein GI | 269794076 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.977582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.014911 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACGC AGAGCAGCAG CACGCCGCAC GCGGCGCGTC CGCCGGTCGA CGACACCTCG GTCCCGTCCT TCGAGTCGTC GGGCGGAGAC TGGGACGAGA TCGCGGCCGA GATCGCCGAG CTCGGCGAGG AGCGCATCGT CGTCAACATG GGCCCGCAGC ACCCGTCGAC CCACGGCGTG CTGAGGCTCA TGCTCGAGAT CGACGGCGAG ACGGTCACCG AGGCACGGTG CGGGGTGGGC TACCTGCACA CGGGCATCGA GAAGAACATG GAGTTCCGCA CCTGGACGCA GGGCGTCGCG TTCTGCACCC GGATGGACTA CCTGGCGCCG TTCTTCCAGG AGGCCGCGTA CTGCCTCGGG ATCGAGCGGC TGCTCGGCGT CGAGGACGAC GTCCCCGAGC GGGCGCAGGT GATCCGGGTG CTGCTCATGG AGCTCAACCG GGTGGCGAGC CACCTCGTGT GCCTGGGGAC CGGCGGCAAC GAGATGGGCG CCACGACGGT GATGACCGTG AGCTTCACGG CACGCGAGGA GATCCTGCGG ATCTTCGAGT CGATCACCGG GCTGCGGATG AACCACGCGT TCATCCGCCC GGGCGGGGTG GCCCAGGACG TCCCGGCGGG TCTGACCGAG GACTTCTGGC ACATGGACAC CGAGGTGCGC AAGTACCTCG CGCAGCTCGG CGACCTCATG CTCGCCAACC CGATCTTCAG GTCTCGTCTG GTCGGCACCG GGCACCTCAA CCTCGCGGGC TGCATGGCGC TCGGGGTCAC CGGTCCCGTG CTCCGCTCGG CCGGCCTGCC CTACGACGTC CGCAAGTCCG CGCCGTACTG CGGCTACGAG ACCTACGACT TCGACGTCCC GACCTCCACG GAGGCCGACT GCTACTCGCG CGTGGTGCTG CGCATCGAGG AGTGCTACCA GTCGCTCAAG ATCGCGGCGC AGTGCATCGA GCGCCTCGAG CGCTCGACGG GCGACCCGGT GATGGTCGCC GACAAGAAGA TCGCGTGGCC CGCGCAGCTG GCCATCGGCA CCGACGGCGC CGGCAACTCC CTCGAGCACA TCAGGGAGAT CATGGGCGAG TCCATGGAGT CGCTGATCCA CCACTTCAAG CTCGTGACCG AGGGCTTCCG GGTCCCGGCG GGGCAGGTGT TCCAGACCGT GGAGCACCCG CGCGGCGAGC TCGGCGTGCA CCTCGTCTCC GACGGCGGGA CGAGACCCTA CCGGGCGCAC TTCCGTGACC CGTCGTTCAA CAACCTGCAG GCCGTGGCCC TGATGTGCGA GGGCGGCCAG GTCGCCGACG TCGTCGTCGC GGTGGCCTCG CTCGACCCCG TCCTCGGAGG TGTAGACCGA TGA
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Protein sequence | MSTQSSSTPH AARPPVDDTS VPSFESSGGD WDEIAAEIAE LGEERIVVNM GPQHPSTHGV LRLMLEIDGE TVTEARCGVG YLHTGIEKNM EFRTWTQGVA FCTRMDYLAP FFQEAAYCLG IERLLGVEDD VPERAQVIRV LLMELNRVAS HLVCLGTGGN EMGATTVMTV SFTAREEILR IFESITGLRM NHAFIRPGGV AQDVPAGLTE DFWHMDTEVR KYLAQLGDLM LANPIFRSRL VGTGHLNLAG CMALGVTGPV LRSAGLPYDV RKSAPYCGYE TYDFDVPTST EADCYSRVVL RIEECYQSLK IAAQCIERLE RSTGDPVMVA DKKIAWPAQL AIGTDGAGNS LEHIREIMGE SMESLIHHFK LVTEGFRVPA GQVFQTVEHP RGELGVHLVS DGGTRPYRAH FRDPSFNNLQ AVALMCEGGQ VADVVVAVAS LDPVLGGVDR
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